Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03284 ATGGCTGGCGAGCTGATGATCGATTTTGCTTCTTCTTCTTCTTTGGTTTCTCCTAAAAAATATGATGTTTTTCTTAGCTTTCGTGGTGAGGATACTCGCAAGGGCTTCATAAGCCATCTTCATGATGCCTTGATCCAAAAGAAAGTTGAAACCTATATAGACTACCGGCTTCAAAAGGGAGACAAGATCTCAGAAGCACTCATCAAAGCCATAGAAGAGTCACATGTATCTGTTGTCATCTTCTCACAAAACTATGCTACCTCCAAGTGGTGCTTGGATGAAATCAACGAGATTATAGAATGCAAGAAGAAACTGGGACAAGATGTTATACCTGTGTTCTACGAAGTAGATCCATCACATGTAAGGAATCAGAGAGGGAGCTATGAGGAAGCGTTTGCAACACATCAGCGAGATCTGAAGATCAGCCATGACAGGGTCCAAAATTGGAGAGGTGCTCTCAAAGAATCAGCCAATTTGGCTGGGTGGGATTCTCGGACTTATGGGACTGAATCTGGATTCATTAAGGACATTGTCAATGACGTTTTACAAAAACTGAATGTCATATACCCGATTGAATTCAAGGGAATGGTTGGAATCGAGGAAAATTATGCAGGAGTTCAATCATTATTAGACATTGGCTCACAAGAAGTTCGGATGATTGGAATATGGGGCATGGGTGGCATAGGTAAGACCGCCCTGGCAAGTGCTTTACATGCCAAACTGTCTTCTCAATTTGAAGGTCGTTGCTTTCTCCCAAGTGTAAGGGAAAAATTAGAAAAGTATGGTCTAGATGTCTTGCGCAACAAGCTTTTTTCTGACTTGTTAGAGGAAGAAAATCTTCATGTTGATGTACCCAAAGTTGTACCCCATTTTGTGACGAGTAGGCTTCGATGTAAAAGAGTTTTTATTGTTTTGGATGATGTGGCTGACTCAGAACAGTTAGAAGATCTAATCAGTGATTATGATAGTTTGGGACCAGGAAGTAGGGTGATTGTAACAACTAGAGATAAGCACATATTTAGCCATGTTGACGGAATTTATGAGGTCAAGGAATTGAATGACCATCACTCTCTTCAGCTTTTCTGTTGGAATGCCTTCCGAGAAAAACATCCTAAAGAAGGATATGAAGAGCTATCAAAAAATCTAATTGCCTATTGCAAAGGCAATCCTTTGGCCTTGAAAGTTTTGGGTGCACATTTTCGTTCAAAAAGTACAGAAACATGGAAATGTGAGTTAAGAAAGCTCCAGAAGATTCAAAATGTGAAAATTCATAATGTGCTGAAGTTGAGTTTGGATGACTTGGATTGTACTGAGAAGGACATATTTCTTGACATTGCATGCTTCCTCAAAGGAGAATATAGAGATCATGTAACAAGTTTATTGGAAGCTTGTGATTTCTTTGCAGCCGCTGGGGTAGAAGTTCTTTTAGATAAGTCGCTTATAACTATTTCAGATAAGTGTACAATAGAAATGCATGACTTGATACAAGAAATGGGCTGGAAAATTGTTCGTCAAGAATCTATCAAAGACCCTGGAAAACGAAGTCGATTGTGGGATCCTGAGGAAGTATCTCATGTGTTGAAATATGATAGGGGGACTGAAGCTATAGAAGGCATAATGTTAGATGTGTCTAAAATTGGGGATCTACATTTGAGCTTTGATTGCTTTGCAAAAATGACCAACATAAGATTTCTCAAATTCCATGATGGGAAGGAGAGTGGCAGTTGTAAGATATACCTTCCTAACGGTCTTGAGTCATTGCCTGACAAATTGAGGTACCTTCAATGGCATGGATACTCTCAGGAGTCTTTGCCATCAACCTTCAATGCTAAATTACTTGTTGAGCTTTCCATGTCATCTAGCAACCTTGAGAAGCTTTGGGATGGAGTTCAGAATCTTGTGAATTTGAAGGGAATCGACCTTAGTTTATCTGAACACTTGGTTGAGATCCCAGATTTATCTATGGCCACAAATCTAGAAGGATTATCTCTTGCTCGGTGTAGAAGTTTGCGTCATGTCCATCCATCCATTTCGTCTCTCCACAAGCTTCGGCATCTAGATTTAGCAGAGTGTACAGAGATTGAAAGCCTTCAAAGTGACAATCATTTAAAATCTCTCCGTTTCCTCCGTCTAAGCAACTGCTCATCCCTAAGGGAATTTTCAATGTCCTCGGAGGAACTTGAGCTATTGTGGTTAGATGGTACAATTATCCAAGAATTGCCCTCATCAGTATTGTGTTGTGCGAAACTTAGGCTTATCAATCTTCAAGATTGTGACAATCTTCACAGTTTTGGGAATGATCCTTTGTGCCTGGGATCTCTTGATCGTCTGGTCCTTGCTGGCTGCAAACTACTCAATGCATCAAATCTAAGTTTTATCCTTGATGGTCTCCGGTCTTTAAGGTTACTGGATTTGGAAAATTGTTGCAACTTAGAAGCACTCCCTGACAACATTGGCTTGCTATCATCATTACATTGCTTGAAACTGAGTGGAAGCAATGTTGAGAGCTTGTCTGCAAACATCAAGAACCTTTTGATGCTAGAAGAGCTTACGTTAAACAATTGCAGGAAACTCGTGTCTCTGCCAGAACTTCCACCATCCTTTCGAGTGTTAAGTGCCATTAACTGCACATCTCTGGTGACAGACTTCACTCAATTGTACATGTCTTTTTTAGTTAAACCTAGACATAAAAAATCTGTTTTCCACCCTGGAGCCCTAGTTCCAGACTGGTTTAGCTTTCGTGCGGAAGAGGCTTCAATAACTATTCCCTATCTTCCCTTATCTGGCTTATACGGCTTTGTTTTTTCCCTCATTGTTACTCGGTCACCACCAAATTGCAAGTACAAATCTATTGGATGTCTTATCTACAAATATGACAAACTAATAAGGAGAGAAGATACCTTTTTGGATGATCTGGAATTAATTCCAGATCATGTGTCTCTTTGGTATATTGACATGAAAAAAGATGAAGTGTGTGATCCTCACAACATGTCATTTAATTTCTTTCTTCAACATGAGGATGGTAAATGGTCAATGAAAGGGATAAAAGGGTGTGGGGTCTACCCAATATATGCCTCGGAACAAAAGGGATTGGAGTTGGAGTTGGAGTTTGGGGGTCGTTCTAAAGATATTGTTGAGTTAGAACCCAACAATTCTAAAGATATTGATGAGTTACAGCCCAGGGCAATTGGATTTAGAGTTGAAGAATCAAATTATAACAATGAAGATGACCAAGCTTCGGAATTGCTGGAAGTTATGCACAAAACAATTACAACAGGTATGCAGAATGAAAATGTGGGCTTGAATGAAAACTCTTCGTGTCACAGCTTCATAGTTTCAACAGCGCAAAGTTGTATGAGAAAACAACAAAGTTTCAAGGAAGTGGATTGCTGTGTAAGTTCAATACCAAAAAATCAAATTATCCCCTTTGACACTCCAAGTGCTTCCAACATCAATTCGAATCAGACTATTGAAGTGTCAAAAGAAAAAGATTTGACCAACAATCAAGTCAAGAAATATTCGAAGTCGTTCATGTTTGAGAAAGTTTATAATACTCTTGCGGAGATTGACAATCCACATCTTGAACCAAATTGGGATCCAATTGCCGAGCTCGAGAGCTTGTTATATGATAGTTATAAGTTGGTTCCAATGTCCATTCACTCAACAATTGTTTCAAAGACTGATGTCCAAGATCCAAATGTGGCAGCTATCCTTGAAAAGTTGGAGACCCTTTTGGAGACCTCCCTTGAAATCATCTCTTCAGATGATAAAGTCAAGCAACAATTGCATCATGTTTTGGAACAATTTGGCCAATTTGAAGATCGGTTACCTATCAAGCTTCGTCAAGTGATTCACAAGTTAAAGGCTTTCATTGAAGGTGTTGATGTTAGATTTGCGACCGATCAAATAACTATCCAAAATTATGATCAACTGCTCCAGTCAAGGTCTCTTCTATCAAAGCAACTGGGAAGTGCCAAAGCCCTCCAAGACCAATTTAAGTCAAAAGTCTCTCAAGGTAAAATACAAATTGAAAAGATCAATTCTGAGATTGTCGATTTGGAACAAAAATTAAGTGTTTTGGTTGAGACTAGAGATCGGCTAAAGAGAGCCTTAGGCTATTGTGATTTTGAAAATAGTCAGCTAAAGACTCAAGTTGCACAATGGGTACCAGAATGCAAGACTATCATCTCAACTTTGAAGAAGTATGAGACATCTTACAAAGTGGCCCTAACCAATAAGAAGAAAGCAGAAGATGAATGGGCTGATCTAAAGAAGGCATTTTTAGCTAATAAGATTTAA 4299 0.3917 MAGELMIDFASSSSLVSPKKYDVFLSFRGEDTRKGFISHLHDALIQKKVETYIDYRLQKGDKISEALIKAIEESHVSVVIFSQNYATSKWCLDEINEIIECKKKLGQDVIPVFYEVDPSHVRNQRGSYEEAFATHQRDLKISHDRVQNWRGALKESANLAGWDSRTYGTESGFIKDIVNDVLQKLNVIYPIEFKGMVGIEENYAGVQSLLDIGSQEVRMIGIWGMGGIGKTALASALHAKLSSQFEGRCFLPSVREKLEKYGLDVLRNKLFSDLLEEENLHVDVPKVVPHFVTSRLRCKRVFIVLDDVADSEQLEDLISDYDSLGPGSRVIVTTRDKHIFSHVDGIYEVKELNDHHSLQLFCWNAFREKHPKEGYEELSKNLIAYCKGNPLALKVLGAHFRSKSTETWKCELRKLQKIQNVKIHNVLKLSLDDLDCTEKDIFLDIACFLKGEYRDHVTSLLEACDFFAAAGVEVLLDKSLITISDKCTIEMHDLIQEMGWKIVRQESIKDPGKRSRLWDPEEVSHVLKYDRGTEAIEGIMLDVSKIGDLHLSFDCFAKMTNIRFLKFHDGKESGSCKIYLPNGLESLPDKLRYLQWHGYSQESLPSTFNAKLLVELSMSSSNLEKLWDGVQNLVNLKGIDLSLSEHLVEIPDLSMATNLEGLSLARCRSLRHVHPSISSLHKLRHLDLAECTEIESLQSDNHLKSLRFLRLSNCSSLREFSMSSEELELLWLDGTIIQELPSSVLCCAKLRLINLQDCDNLHSFGNDPLCLGSLDRLVLAGCKLLNASNLSFILDGLRSLRLLDLENCCNLEALPDNIGLLSSLHCLKLSGSNVESLSANIKNLLMLEELTLNNCRKLVSLPELPPSFRVLSAINCTSLVTDFTQLYMSFLVKPRHKKSVFHPGALVPDWFSFRAEEASITIPYLPLSGLYGFVFSLIVTRSPPNCKYKSIGCLIYKYDKLIRREDTFLDDLELIPDHVSLWYIDMKKDEVCDPHNMSFNFFLQHEDGKWSMKGIKGCGVYPIYASEQKGLELELEFGGRSKDIVELEPNNSKDIDELQPRAIGFRVEESNYNNEDDQASELLEVMHKTITTGMQNENVGLNENSSCHSFIVSTAQSCMRKQQSFKEVDCCVSSIPKNQIIPFDTPSASNINSNQTIEVSKEKDLTNNQVKKYSKSFMFEKVYNTLAEIDNPHLEPNWDPIAELESLLYDSYKLVPMSIHSTIVSKTDVQDPNVAAILEKLETLLETSLEIISSDDKVKQQLHHVLEQFGQFEDRLPIKLRQVIHKLKAFIEGVDVRFATDQITIQNYDQLLQSRSLLSKQLGSAKALQDQFKSKVSQGKIQIEKINSEIVDLEQKLSVLVETRDRLKRALGYCDFENSQLKTQVAQWVPECKTIISTLKKYETSYKVALTNKKKAEDEWADLKKAFLANKI* 1433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03284 1432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 445 IPR027417 -
Rops11g03284 1432 Gene3D - 351 435 IPR042197 -
Rops11g03284 1432 Gene3D - 187 349 IPR027417 -
Rops11g03284 1432 Pfam TIR domain 20 195 IPR000157 GO:0007165
Rops11g03284 1432 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Rops11g03284 1432 Gene3D - 16 186 IPR035897 -
Rops11g03284 1432 PRINTS Disease resistance protein signature 386 400 - -
Rops11g03284 1432 PRINTS Disease resistance protein signature 701 717 - -
Rops11g03284 1432 PRINTS Disease resistance protein signature 295 309 - -
Rops11g03284 1432 PRINTS Disease resistance protein signature 219 234 - -
Rops11g03284 1432 SUPERFAMILY L domain-like 491 877 - -
Rops11g03284 1432 Coils Coil 1336 1370 - -
Rops11g03284 1432 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 723 IPR044974 GO:0006952
Rops11g03284 1432 FunFam Disease resistance protein RPS4 533 725 - -
Rops11g03284 1432 Pfam Leucine Rich Repeat 613 631 IPR011713 -
Rops11g03284 1432 Gene3D Ribonuclease Inhibitor 726 891 IPR032675 -
Rops11g03284 1432 Gene3D Ribonuclease Inhibitor 536 725 IPR032675 -
Rops11g03284 1432 Pfam NB-ARC domain 209 424 IPR002182 GO:0043531
Rops11g03284 1432 SMART till_3 20 159 IPR000157 GO:0007165
Rops11g03284 1432 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Rops11g03284 1432 Coils Coil 1399 1419 - -
Rops11g03284 1432 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03284 Rops-Chr11 62693892 62706205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03284 17 857 WRKY Transcription Factor Family AT4G12020 33.995 3.17e-118 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03284 - - gsj:114410062 1731.46