Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03283 ATGGCTGGCCACCAGATGATCGATTTTGCTTCTTCTTCTTTGGTTTCTCCTAAAAAATATGACGTTTTTCTTAGCTTTCGTGGTGAGGATACTCGCAAGGGCTTCATAAGCCATCTTCATGATGCCTTGATCCAAAAGAAAGTTGAAACCTATATAGACTACCGGCTTCAAAAGGGAGACAAGATCTCAGAAGCACTCATCAAAGCCATAGAAGAGTCACATGTATCTGTTGTCATCTTCTCACAAAACTATGCTACCTCCAAGTGGTGCTTGGATGAAATCAACGAGATTATAGAATGCAAGAAGAAACTGGGACAAGATGTTATACCTGTGTTCTACGAAGTAGATCCATCACATGTAAGGAATCAGAGAGGGAGCTATGAGGAAGCGTTTGCAACACATCAGCGAGATCTGAAGATCAGCCATGACAGGGTCCAAAATTGGAGAGGTGCTCTCAAAGAATCAGCCAATTTGGCTGGGTGGGATTCTCGGACTTATGGGACTGAATCTGGATTCATTAAGGACATTGTCAATGACGTTTTACAAAAACTGAATGTCATATACCCGATTGAATTCAAGGGAATGGTTGGAATCGAGGAAAATTATGCAGGAGTTGAATCATTATTAGACATTGGCTCACAAGAAGTTCGGATGATTGGAATATGGGGCATGGGTGGCATAGGTAAGACCACCCTGGCAAGTGCTTTACATGCCAAGCTGTCTTCTCAATTTGAAGGTCATTGCTTTCTCCCAAGTGTAAGGGAAAAATTAGAAAAGTATGGTCTAGATGTATTGCGCAACAAGCTTTTTTCTGACTTGTTAGAGGAAGAAAATCTTCATGTTGATGTACCCAAAGTTGTATCCCATTTTGTGATCAGTAGGCTTCGACGTAAAAGAGTTTTTATTGTTTTGGATGATGTGGCTGACTCAGAACAGTTAGAAGATCTAATCAGTGATTGTGATAGTTTGGGACCAGGAAGTAGGGTGATTGTAACAACTAGAGATAAGCACATATTTAGCCACGTTGATGGAGTTTATGAGGTCAAGGAATTGAGAGACCATGACTCTCTTCAGCTTTTCTGTTGGAATGCCTTCCGAGAAAAACATCCTAAAGATGGATATGAAGAGCTATCAAAAAATGTAATTGCCTATTGCAAAGGCAATCCTTTGGCTTTGAAAGTTTTGGGTGCTCGTTTTCGTTCAAGAAGTACAGAAATATGGAAATGTGAATTGAGAAAGCTCCAAAAGGTTCCAAATGTGAAAATTCATAATGTGCTAAAGTTGAGTCTTGATGACTTGGATTGTACTGAGAAGGACATATTTCTTGACATTGCATGCTTTCTCAAAGGAGAATATAGAGATCACGTAACAAGTTTATTGGAAGCTTGTGATTTCTTTGCAGTTGCTGGGGTAGAAGCCCTTTTAGACAAGTCGCTTATAAATATTTCAGATAAGTGTACAATAGAAATGCATGACTTGATACAAGAAATGGGCTGGAACATTGTTCGTCAAGAATCTATCAAAGACCCTGGAAGACGAAGTCGATTGTGGGATCCCGAGGAAGTGTCTGATGTATTGAAATATGATAGGGGAACTAAAGCTATAGAAGGCATAATGTTAGATGTATCTAAAATTGGGGATCTACATTTGAGCTTTGATTGCTTTGCAAAAATGACCAACATAAGATTTCTCAAATTCCATGATGGGAAGGGGAGTAGCAGTTGTAAGATATACCTTCCTAACGGTCTTGAGTCATTGTCTGACAAATTGAGGTACCTTCAGTGGCATGGATATTCTCAGGAGTCTTTGCCATCAACCCTCAATGCTAAATTGCTTGTTGAGCTTTCCATGCCATCCAGCAACCTTAAAAAGCTTTGGGATGGAGTTCAGAATCTTGTGAATTTGAAGGGATTCGACCTTAGTTTCTCTGAGCACTTGGTTGAGGTCCCAGACTTATCTATGGCCACAAATCTTGAAGGATTATCTCTTACTCAGTGTAAAAGTTTGCGTCATGTTCATCCATCCATTTTGTCTCTCCACAAGCTTCGGCATCTGGATTTAGCAGAGTGCATAGAGATTGAAAGCCTTCAAAGTGACATTCATTTAAAATCTCTTCGTTTCCTTCGTCTAAGCAACTGCTCATCCCTAAAGGAATTTTCAATGTCCTCGGATGAACTAGAGCAATTGTGGTTAGATGGTACAGTTATCCAAGAATTGCCCTCATCAGTATTGTGTTGTGCGAAACTTAAGCTTATCAATCTACAAGATTGTGACAATCTTCAGAGTTTTGGGAATGAGTTATCATATGATCCTTTCTGGCTGAGATCTCTTGATCGTCTGGTCCTTGCTGGCTGCAAACTACTCAATGCATCAAATCTAAGTTTTATCCTTGATGGTCTCCGGTCTTTAAGGTTGCTGGATTTGGAAAATTGTTGCAACTTAGAAGCACTCCCTGACAACATTGGCTTGCTATCATCATTACATTGCTTGAAACTGAGTGGAAGCAATGTTGAGAGCTTGTCTGCAAACATCAAGAACCTTTTGATGCTAGAAGAGCTTATGTTAAACAATTGCAGGAAACTCGTGTCTCTGCCAGAACTTCCACCGTCCTTTCTGGTGTTAAGTGCTGTTAACTGCACATCTCTGGTGACAGACTTCACTCAATTGCACATGTCTTTTTTACTTAAACCTGGACCTAAAAAATCTGTTTTCCGCCCTGGAGCCCAAGTTCCAGACTGGTTTAGCTTTCGTGCAGAAGAGGCTTCAATAACTATTCCCCATCTTCCCTTATCTGGCTTATGCGGCTTTGTTTTTTGCCTCATTCTTACTCGATCACCGCCAAATTGCAAGTATGGCTCTGTTGCATGTTTTATCTACAAATATTACAAAAGAATAATGAGAGAAGGTACCTTTCTAGATGATCTTGAATTAATTACGGATCATGTATTTCTTTGGTATGCTGACATCAAAAAAGATGAAGTGTGTGATCCTTACAACATATCATTTAATTTCAATCTTCAACATGAGGATGGTGAATGGTCAATGAAGGAGATAAAGGGGTGTGGGGTCTATCCAATATATGCCTCAGAACAAAAGAGATTAGAGTTAGAGTTTGGGGGTAGTTCTAAAGATATTGTTGAGTTAGAACCCAACAGTTCTACAGATATTGATGAGTTACAGCCCAGAGCAATTGGATTTAGAGTTGAAGAATCAAATCATAACAATGAAGATGACCAAACTAAGAAATTGCAGGAAGTTATGCTCAAAACAATTACAACAGGTATGCAGAATGAAAATGAGGGCTTGAATGAAAACTCTTCGTGTCACAGCTTCATAGTTTCAACAGCACATCGTTGTCAGAGAAAACCGCAAAGTTTCAAGGAAGTGGATTACTGTATTATCCCCTTTGACACTCCAAGTGCTTCCAACATTGATTCAAATCAGACTATTGAAGTGTCAGAAGAAAAAGATTTGACCAACAATCAAGTCAACAAATATTCTAAGCCGTTCATGTTTGAGAAAGTTCAAACTCTTGCGGAGATTGACAATCCACATCTTGAACCGGATTGGGATCCAATTGCCGAGCTCGAGAGCTTGTTATGTGATAGTTATAAGTTGGTTCCAATGTCCATTCACTCAACAACCGTTTCAGAGACTGATGTCCAGGATCCAAATGTGGCTGCTATCCTTGAAAAGTTAGAGTCCCTTTTGGAGACCTCCCTTGAAATTCTCTCTTCAGACAATAAAGTCAAGCAACAATTGCATCATGTTTTGGAGCAATTTGGCCAATTTGAAGACCGAGTACCTATCAGGCTTCATCCTGTGATTCACAAGTTAAAAGCTTTCATTGAAGGTGTTGATGTCAGATTTGCAACTGACCAAATAACTATCCAAAATTATGATCAACTGCTCCAATCAAGGTCTCTTCTATCAAAGCAATTGGAAAGTGCCAAAGCCCGCCAAGACCAATTTAGTTCAAAAGTTTCTCAAGGTAAAATGCAAATTCAAAAGATCAATTCTGAGATTGTCGAATTGGAACAAAAATTAAGTGTTTTGGTTGATACTAGAGACAGGCTAAAGAGAGCCTTAGACTATTGTGATGTTGAAAATAGCCAGCTAAAGACTCAAGTTGCACAATGGGTGCCAGAATGCAAGACTATCATCACAACTTTGAAGAAGTATGAGACATCTTACAAAGTGGCCCTAACTAATAAGAAGAAAGCTGAGGATGAATGGGCTGATCTAAAGAAGGCCTTTTCAGCTAATAAGATTTGA 4275 0.3944 MAGHQMIDFASSSLVSPKKYDVFLSFRGEDTRKGFISHLHDALIQKKVETYIDYRLQKGDKISEALIKAIEESHVSVVIFSQNYATSKWCLDEINEIIECKKKLGQDVIPVFYEVDPSHVRNQRGSYEEAFATHQRDLKISHDRVQNWRGALKESANLAGWDSRTYGTESGFIKDIVNDVLQKLNVIYPIEFKGMVGIEENYAGVESLLDIGSQEVRMIGIWGMGGIGKTTLASALHAKLSSQFEGHCFLPSVREKLEKYGLDVLRNKLFSDLLEEENLHVDVPKVVSHFVISRLRRKRVFIVLDDVADSEQLEDLISDCDSLGPGSRVIVTTRDKHIFSHVDGVYEVKELRDHDSLQLFCWNAFREKHPKDGYEELSKNVIAYCKGNPLALKVLGARFRSRSTEIWKCELRKLQKVPNVKIHNVLKLSLDDLDCTEKDIFLDIACFLKGEYRDHVTSLLEACDFFAVAGVEALLDKSLINISDKCTIEMHDLIQEMGWNIVRQESIKDPGRRSRLWDPEEVSDVLKYDRGTKAIEGIMLDVSKIGDLHLSFDCFAKMTNIRFLKFHDGKGSSSCKIYLPNGLESLSDKLRYLQWHGYSQESLPSTLNAKLLVELSMPSSNLKKLWDGVQNLVNLKGFDLSFSEHLVEVPDLSMATNLEGLSLTQCKSLRHVHPSILSLHKLRHLDLAECIEIESLQSDIHLKSLRFLRLSNCSSLKEFSMSSDELEQLWLDGTVIQELPSSVLCCAKLKLINLQDCDNLQSFGNELSYDPFWLRSLDRLVLAGCKLLNASNLSFILDGLRSLRLLDLENCCNLEALPDNIGLLSSLHCLKLSGSNVESLSANIKNLLMLEELMLNNCRKLVSLPELPPSFLVLSAVNCTSLVTDFTQLHMSFLLKPGPKKSVFRPGAQVPDWFSFRAEEASITIPHLPLSGLCGFVFCLILTRSPPNCKYGSVACFIYKYYKRIMREGTFLDDLELITDHVFLWYADIKKDEVCDPYNISFNFNLQHEDGEWSMKEIKGCGVYPIYASEQKRLELEFGGSSKDIVELEPNSSTDIDELQPRAIGFRVEESNHNNEDDQTKKLQEVMLKTITTGMQNENEGLNENSSCHSFIVSTAHRCQRKPQSFKEVDYCIIPFDTPSASNIDSNQTIEVSEEKDLTNNQVNKYSKPFMFEKVQTLAEIDNPHLEPDWDPIAELESLLCDSYKLVPMSIHSTTVSETDVQDPNVAAILEKLESLLETSLEILSSDNKVKQQLHHVLEQFGQFEDRVPIRLHPVIHKLKAFIEGVDVRFATDQITIQNYDQLLQSRSLLSKQLESAKARQDQFSSKVSQGKMQIQKINSEIVELEQKLSVLVDTRDRLKRALDYCDVENSQLKTQVAQWVPECKTIITTLKKYETSYKVALTNKKKAEDEWADLKKAFSANKI* 1425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03283 1424 Pfam C-JID domain 906 1031 IPR045344 -
Rops11g03283 1424 Gene3D Ribonuclease Inhibitor 727 893 IPR032675 -
Rops11g03283 1424 Gene3D Ribonuclease Inhibitor 535 726 IPR032675 -
Rops11g03283 1424 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Rops11g03283 1424 SUPERFAMILY L domain-like 490 872 - -
Rops11g03283 1424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 720 IPR044974 GO:0006952
Rops11g03283 1424 Coils Coil 1300 1320 - -
Rops11g03283 1424 PRINTS Disease resistance protein signature 385 399 - -
Rops11g03283 1424 PRINTS Disease resistance protein signature 218 233 - -
Rops11g03283 1424 PRINTS Disease resistance protein signature 294 308 - -
Rops11g03283 1424 PRINTS Disease resistance protein signature 700 716 - -
Rops11g03283 1424 Gene3D - 350 434 IPR042197 -
Rops11g03283 1424 Coils Coil 1328 1362 - -
Rops11g03283 1424 SMART till_3 19 158 IPR000157 GO:0007165
Rops11g03283 1424 Pfam TIR domain 19 194 IPR000157 GO:0007165
Rops11g03283 1424 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Rops11g03283 1424 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Rops11g03283 1424 Pfam Leucine Rich Repeat 612 630 IPR011713 -
Rops11g03283 1424 Gene3D - 186 349 IPR027417 -
Rops11g03283 1424 Coils Coil 1391 1411 - -
Rops11g03283 1424 Gene3D - 15 185 IPR035897 -
Rops11g03283 1424 Pfam NB-ARC domain 209 420 IPR002182 GO:0043531
Rops11g03283 1424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 444 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03283 Rops-Chr11 62665762 62673673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03283 16 860 WRKY Transcription Factor Family AT4G12020 33.488 5.83e-119 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03283 - - gmx:100809963 1839.31