LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops11g03282	ATGGAGTTTTTGCATAGTCACAGGGTAGAGGTGATAAGTATGGCAGTTGCTCTTGTTGCCATTGTTGGTGGCACCGCTTATTATTACTATGTCACCAAGAAACCTAAAGGGTGCTTGGATCCTGAGAGCTTCAAGGAATTTAAACTTGTTAAACGCACTCAACTCAGCCATAATGTTGCCACATTCAGATTTGATCTTCCTACTCCTGACTCAGTGTTGGGACTTCCCATTGGACAACATATCAGCTGCAGAGGGAAAGATAGTCTTGGTGAAGAAGTTGTTAAACCATATACTCCAACAACATTGGATACTGATGTTGGATACTTTGAATTGGTTGTAAAGATGTATCCACAAGGAAGAATGTCTCATCACTTTAGGGAGATGCATGAAGGTGATTACATGGCTGTGAAAGGACCAAAGGGACGTTTTAAGTACCAGCCCAACCAAGTAAGAGCTTTTGGTATGATTGCTGGTGGCACTGGCATTACCCCAATGTTTCAGGTTACTAGAGCTATACTAGAAAACCCACAGGACAAAACCAACATAAATCTGATATATGCCAATGTCACATATGATGACATTCTTCTAAAGGAAGAGCTGGATAATTTTGCCGTTAAGTTCCCAAGTCGATTCAAAGTTTATTATGTTCTAAATCAGCCACCAGAAGTATGGGATGGTGGTGTTGGATTCGTGTCCAAGGAAATGATCCAAGCACATTGCCCTACACCAGCAGCGGACACTAAGATATTAAGGTGTGGACCACCTCCCATGAACAAGGCTATGGCTGCTCATCTTGAATCACTTGGATACAGTCCCCAGATGCAGTTTCAGTTTTAG	837	0.4217	MEFLHSHRVEVISMAVALVAIVGGTAYYYYVTKKPKGCLDPESFKEFKLVKRTQLSHNVATFRFDLPTPDSVLGLPIGQHISCRGKDSLGEEVVKPYTPTTLDTDVGYFELVVKMYPQGRMSHHFREMHEGDYMAVKGPKGRFKYQPNQVRAFGMIAGGTGITPMFQVTRAILENPQDKTNINLIYANVTYDDILLKEELDNFAVKFPSRFKVYYVLNQPPEVWDGGVGFVSKEMIQAHCPTPAADTKILRCGPPPMNKAMAAHLESLGYSPQMQFQF*	279

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops11g03282	278	Pfam	Oxidoreductase FAD-binding domain	47	145	IPR008333	-
	Rops11g03282	278	FunFam	NADH-cytochrome b5 reductase	37	136	-	-
	Rops11g03282	278	Pfam	Oxidoreductase NAD-binding domain	155	261	IPR001433	GO:0016491
	Rops11g03282	278	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	154	173	IPR001709	GO:0016491
	Rops11g03282	278	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	192	203	IPR001709	GO:0016491
	Rops11g03282	278	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	248	256	IPR001709	GO:0016491
	Rops11g03282	278	CDD	cyt_b5_reduct_like	47	278	-	-
	Rops11g03282	278	PRINTS	Cytochrome B5 reductase signature	248	256	-	-
	Rops11g03282	278	PRINTS	Cytochrome B5 reductase signature	131	145	-	-
	Rops11g03282	278	PRINTS	Cytochrome B5 reductase signature	73	84	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops11g03282	Rops-Chr11	62651925	62660197	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops11g03282	27	278	NADPH P450 reductases	AT5G17770	78.571	5.79e-155	431

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops11g03282	K00326		-	gmx:100812559	527.709

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