Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03274 ATGAAGAAGTTTGCTCTTTATGCTTGTCTCCTCAACTTGAGTCTTTTGGTTATTTTTCCCTTTAGCAAAGCCAGTCAAGCTGACAAACTAGATGAGTTGATTCTATCCAGGAGCTCACAGAAACCTCCTGTGACTCTTTCTTGGGAAGAGGAAGATGCATTGAAAACACATTCTTCTTCTGCTTATGGTGCATCCCAAGAGGGACTAAGAAAGGCTGACAAGATTGTTGCATTGCCTGGCCAGCCCTATGGGGTGAATTTTGACCAATATGCAGGCTATGTCACAGTTGATTCACAGGCTGGAAGAAACCTTTTCTATTATTTTGTGGAGTCTCCATATTCCCCTTCAACTAAACCTTTAGTATTGTGGCTCAATGGAGGACCTGGTTGTTCCTCACTGGGGTATGGAGCCTTTGAGGAGCTGGGACCCTTCAGAGTCAGCCCTGATGGCAAAACTCTCTTCCGTAACAAATATGCTTGGAATGAAGTGGCAAATGTGCTCTTCTTGGAATCTCCAGCAGGAGTGGGCTTTTCCTTCTCAAACACTACTTCTGACTATGACCGTGCAGGAGATAAGGCTACTGCCAAGGATGCCTATGTCTTCCTCATCAACTGGCTAGAGAGGTTTCCACAGTACAAAACCAGGGATTTTTACATAACTGGAGAGAGCTATGCTGGTCATTATGTGCCTCAGCTTGCATACACTATCCTTCTGAACAATAAATACAATCCCCCAACCATTATTAACCTCAAAGGCATTGCTATAGGGAATGCTTGGATTGATGATGCTACAGGTTTAAAGGGTCTATATGATTATTTATGGACTCATGCTTTGAACTCAGATCAAACCCATGAGGTGATTGAGAAGTACTGTGACTTCACTTCTGAAAATCTTTCATCAATATGTATCAGTGCAGCACGAAGGGGCTTAGTTGAGAAAGGAAACATAGACTTCTACCACATCTATGCTCCACTATGTCAAGACTCCTCTCTGAAAAAGGGATCAACTGGTTCTGTATATGATTTTGATCCATGTTCTGATTACTATGGTATTGCCTATCTAAATAGGCCAGAGGTGCAAAGGGCACTTCATGCAAAACCTACAAATTGGAGTTACTGCAGTGGTGATACAGATGCAAGGGTGCCAGTCACATCCTCCAGATATGCAATCAACACCCTCAAGCTCCCTATCCAGGAAGCTTGGCGTCCATGGTATTATGGAAATGAGGTTGGAGGATATGTGGAGGGATACAAAGGACTGAAATTGGTTACAGTAAGAGGAGCAGGACATCTGGTTCCAAGCTGGCAACCAGCACGGGCTCTGTCCATGATCTCATCATTCCTCTATGAAAGCCTCCCTCCTGCTCCTTCTGCTTCACCTTAG 1383 0.4403 MKKFALYACLLNLSLLVIFPFSKASQADKLDELILSRSSQKPPVTLSWEEEDALKTHSSSAYGASQEGLRKADKIVALPGQPYGVNFDQYAGYVTVDSQAGRNLFYYFVESPYSPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRVSPDGKTLFRNKYAWNEVANVLFLESPAGVGFSFSNTTSDYDRAGDKATAKDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLAYTILLNNKYNPPTIINLKGIAIGNAWIDDATGLKGLYDYLWTHALNSDQTHEVIEKYCDFTSENLSSICISAARRGLVEKGNIDFYHIYAPLCQDSSLKKGSTGSVYDFDPCSDYYGIAYLNRPEVQRALHAKPTNWSYCSGDTDARVPVTSSRYAINTLKLPIQEAWRPWYYGNEVGGYVEGYKGLKLVTVRGAGHLVPSWQPARALSMISSFLYESLPPAPSASP* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03274 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 75 437 IPR001563 GO:0004185|GO:0006508
Rops11g03274 460 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Rops11g03274 460 Pfam Serine carboxypeptidase 79 374 IPR001563 GO:0004185|GO:0006508
Rops11g03274 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Rops11g03274 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 420 433 IPR001563 GO:0004185|GO:0006508
Rops11g03274 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Rops11g03274 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Rops11g03274 460 Gene3D - 345 374 - -
Rops11g03274 460 Gene3D alpha/beta hydrolase 70 328 IPR029058 -
Rops11g03274 460 SUPERFAMILY alpha/beta-Hydrolases 73 450 IPR029058 -
Rops11g03274 460 Gene3D - 375 451 - -
Rops11g03274 460 FunFam Carboxypeptidase 69 328 - -
Rops11g03274 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 420 437 IPR033124 GO:0004185
Rops11g03274 460 FunFam Carboxypeptidase 357 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03274 Rops-Chr11 62512230 62515585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03274 374 448 Calmodulin-binding Proteins AT2G22960 32.895 1.81e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03274 K16297 - gmx:100779407 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02426 8 55985342 55986076 Rops11g03274 11 62512230 62515585 PCT