Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03257 ATGTATTCCTTGACCTTCTTCTTTGCAAATTTTGGGCCTAATGTTACCACATTTATCGTCCCAGCAGAGATTTTCCCTGCTAGATTTCGAGCTACTTGCCATGGAATATCAACAGCATCTGGGAAGCTTGGGGCTATTGTGGGTGCATTTGGGTTCTTGTATTTAGCACAGAACAAGGACAATAGCAAAGCAGATGCAGGGTACCCTACATGTATTGGTGTGAAAAATTCACTGATTGTCTTGGGAGTTGTTAACGTTTTGGGCTTCTGTTTTACTTTCTTGGTGCCTGAGGCAAAGGGAAAGTCTTTGGAGGAGATGTCAGGTGAGAATAAGGAGGAAGTTTGA 345 0.429 MYSLTFFFANFGPNVTTFIVPAEIFPARFRATCHGISTASGKLGAIVGAFGFLYLAQNKDNSKADAGYPTCIGVKNSLIVLGVVNVLGFCFTFLVPEAKGKSLEEMSGENKEEV* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03257 114 Gene3D MFS general substrate transporter like domains 1 114 IPR036259 -
Rops11g03257 114 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 100 IPR020846 GO:0022857
Rops11g03257 114 Pfam Sugar (and other) transporter 5 107 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops11g03257 114 SUPERFAMILY MFS general substrate transporter 4 107 IPR036259 -
Rops11g03257 114 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03257 Rops-Chr11 62212287 62212631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03257 1 112 Inorganic Solute Cotransporters AT3G54700 81.250 9.48e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03257 K08176 - cam:101514337 206.838