Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03232 ATGAGGCAGCCGGTTCTCTTTGTTCGGTCTCAGCCACTGCTTTCACTCTCTGTGGACATGGATTCCTTTGAGCCAGATGGAAATGGGAAGGAAGAGCCTTTGCCCCCACCACCTCCCGTTGTCCCCTCAGATGTGGTACTGGTCAAAGCAGAAGAGGCTATCCCTGCCCCTGCCAAATATGTTAAGAAAAAAGTTTCAGGTGCTCCAATTGCCAGACCTGGTCTAGGAACAAAAGGAATGAAAATACCTCTTCTAACTAATCACTTCAAAGTTAATGCCACAAACAATGATGGACATTTTTTCCATTATAGTGTGGCTTTTTCTTATGAAGACGGACGCCCTGTGGAAGGTAAGGGTGTAGGGAGAAAGATAATGGACAGGGTGCAGGAGACTTATCATTCTGACTTAAATGATAAGGACTTTGCGTATGATGGGGAGAAAAGTCTGTTTACTATTGGCTCGCTTCCTCAAAACAAGCTTGAGTTTGAAGTTGTTCTTGAAGATGTTACATCTAACAGAAATAATGGCAATTGTAGCCCTGATGGTCATTGTGACAATGAGAGTGACAGAAAGAGGATTCGTCGTCCATACCGTGCAAAAACTTTTAAAGTTGAGATTAGCTATGCTACAAAAATTCCAATGCAGGCCATTGCCAACGCCTTGCGTGGGCAGGAATCAGAGAATTTCCAAGAAGCCATTAGAGTGCTCGATATCATATTGAGGCAGCATGCTGCTAAGCAAGGTTGCCTGCTTGTACGCCAATCTTTCTTTCACAACGATCCGAGGAATTTTGCTGATGTAGGAGGTGGTGTTCTAGGCTGTAGAGGATTCCATTCAAGTTTTAGAACTACACAGAGTGGCCTGTCTTTGAACATAGATGTCTCAACTACCATGATCATTCAACCTGGGCCTGTGGTGGATTTCTTGATTTCCAATCAAAATGCGAGAGATCCTTTTCAACTTGACTGGGCAAAGGCCAAAAGGACTCTAAAGAACCTGAGGATTAAAGTTAACCCATCTAATCAAGAGTACAAAATTACTGGACTCAGTGAACTCCCCTGCAGAGAACAGACTTTTACTCTGAAGAACAAAGGTGGAAACAATGGTGATGATAATTCTGAGGAAGTCACAGTTTATGATTATTTTGTGAATGTTCGTAAGATAGATCTCCGCTACTCAGCTGAGCTTCCATGTATCAATGTTGGCAAGCCTAAGAGGCCGACATATTTCCCTATTGAGCTTTGTGAATTAGTATCCTTGCAACGTTATACAAAAGCTCTGTCCACATTTCAAAGGGCTTCATTAGTGGAGAAGTCCAGGCAGAAGCCACAAGAGCGGATGAATGTTTTGTCTGATGCACTAAAAAGCAGCAACTATGGTTCTGAACCTATGCTTCGGAATTGTGGAATTTCTATTAGCACTGGCTTTACTCAAGTGGAGGGTCGTGTTTTGCCTGCTCCAAGGTTGAAGTTTGGCAATGGTGAGGATTTCAATCCAAGGAATGGGAGATGGAATTTTAATCATAAGAAATTTGTGCAGCCAACAAAGATAGAAAGATGGGCTGTGGTTAATTTTTCTGCACGCTGTGATGTACGGGGGCTTGTGAGGGATCTAACTAGAATTGCAGATATGAAAGGAATTTCGATAGAACCCCCATTTGATGTGTTTGAAGAAAATGGTCAGTTCAGGCGTGCCCCACCTATGGTTAGAGTGGAGAAGATGTTTGAAGACATCCAGTCCAAACTTCCTGGGGCTCCTCAGTTCCTTCTTTGTTTGCTTCCTGATCGGAAAAACTGTGATATTTATGGTCCATGGAAAAAGAAGAATCTTGCTGACTTTGGAATCATTAATCAGTGCATGGCTCCTACAAGGGTCAACGACAATTATCTGACCAATCTTTTGTTGAAGATCAATGCCAAGCTTGGTGGGTTGAATTCATTGTTAGGTGTTGAAATTTCTCCTTCTCTTCCTTTTGTTTCCAAAGCTCCCACCCTCATTCTAGGCATGGACGTGTCACATGGCTCACCAGGGCAGTCTGATATTCCTTCAATTGCTGCGGTGGTCAGCTCCAGACAGTGGCCTCTGATATCAAAATATAGGGCATGTGTTCGAACCCAGTCTGCAAAGGTTGAAATGATAGATAATTTGTTCAAGCAAGTATCAGACAAGGATGATGAAGGCATCATGAGGGAACTTTTGCTTGATTTCTATGTGAGTTCTGGGAAGAGAAAACCAGATAATATAATCATATTCAGGGACGGTGTTAGTGAGTCGCAGTTCAATCAAGTGTTGAATGTTGAACTTAATCAAATCATCGAGGCATGTACATTTCTTGATGAAAAGTGGAACCCAAAATTTGTGGTTATTGTGGCTCAGAAGAACCACCACACAAGATTCTTCCAGCCTGGCTCTCCTGACAATGTCCCACCTGGAACTGTTGTTGACAATAAAATTTGTCATCCCAGAAATTATGATTTCTACCTATGTGCACATGCTGGAATGATAGGTACCAGTAGGCCTACACACTACCATGTGTTGCATGATGAGGTCGGTTTCTCTCCTGATGAAATGCAGGAGCTTGTCCATTCTCTTTCTTATGTGTATCAGAGGAGCACAACTGCCATTTCTGTTGTGGCTCCAATATGCTATGCACACTTGGCTGCAACTCAGTTAGGGCAGTTCATGAAATTTGAGGACAAATCTGAGACATCCTCAAGCCATGGTGGACTGAGTGCTGCTGGAGCCGTCCCTGTCCCTCAGTTGCCTAAATTGCAGGACAGTGTGAGCAATTCAATGTTCTTTTGTTGA 2808 0.4306 MRQPVLFVRSQPLLSLSVDMDSFEPDGNGKEEPLPPPPPVVPSDVVLVKAEEAIPAPAKYVKKKVSGAPIARPGLGTKGMKIPLLTNHFKVNATNNDGHFFHYSVAFSYEDGRPVEGKGVGRKIMDRVQETYHSDLNDKDFAYDGEKSLFTIGSLPQNKLEFEVVLEDVTSNRNNGNCSPDGHCDNESDRKRIRRPYRAKTFKVEISYATKIPMQAIANALRGQESENFQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPRNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLISNQNARDPFQLDWAKAKRTLKNLRIKVNPSNQEYKITGLSELPCREQTFTLKNKGGNNGDDNSEEVTVYDYFVNVRKIDLRYSAELPCINVGKPKRPTYFPIELCELVSLQRYTKALSTFQRASLVEKSRQKPQERMNVLSDALKSSNYGSEPMLRNCGISISTGFTQVEGRVLPAPRLKFGNGEDFNPRNGRWNFNHKKFVQPTKIERWAVVNFSARCDVRGLVRDLTRIADMKGISIEPPFDVFEENGQFRRAPPMVRVEKMFEDIQSKLPGAPQFLLCLLPDRKNCDIYGPWKKKNLADFGIINQCMAPTRVNDNYLTNLLLKINAKLGGLNSLLGVEISPSLPFVSKAPTLILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSAKVEMIDNLFKQVSDKDDEGIMRELLLDFYVSSGKRKPDNIIIFRDGVSESQFNQVLNVELNQIIEACTFLDEKWNPKFVVIVAQKNHHTRFFQPGSPDNVPPGTVVDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLHDEVGFSPDEMQELVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGLSAAGAVPVPQLPKLQDSVSNSMFFC* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03232 935 MobiDBLite consensus disorder prediction 19 39 - -
Rops11g03232 935 Pfam Piwi domain 589 896 IPR003165 GO:0003676
Rops11g03232 935 FunFam Protein argonaute 3 656 935 - -
Rops11g03232 935 Pfam N-terminal domain of argonaute 81 240 IPR032474 -
Rops11g03232 935 Pfam PAZ domain 306 435 IPR003100 GO:0005515
Rops11g03232 935 SMART DUF1785_2 250 302 IPR014811 -
Rops11g03232 935 Gene3D - 483 649 - -
Rops11g03232 935 Pfam Argonaute linker 1 domain 252 300 IPR014811 -
Rops11g03232 935 Pfam Mid domain of argonaute 498 551 IPR032473 -
Rops11g03232 935 Pfam Argonaute linker 2 domain 445 491 IPR032472 -
Rops11g03232 935 CDD PAZ_argonaute_like 302 418 - -
Rops11g03232 935 Gene3D - 655 935 IPR036397 GO:0003676
Rops11g03232 935 SUPERFAMILY Ribonuclease H-like 573 894 IPR012337 -
Rops11g03232 935 ProSiteProfiles PAZ domain profile. 338 419 IPR003100 GO:0005515
Rops11g03232 935 ProSiteProfiles Piwi domain profile. 588 896 IPR003165 GO:0003676
Rops11g03232 935 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 63 898 - -
Rops11g03232 935 SUPERFAMILY PAZ domain 297 459 IPR036085 GO:0005515
Rops11g03232 935 FunFam Protein argonaute 7 297 423 - -
Rops11g03232 935 CDD Piwi_ago-like 463 890 IPR045246 -
Rops11g03232 935 Gene3D paz domain 296 423 - -
Rops11g03232 935 SMART Piwi_a_2 588 896 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03232 Rops-Chr11 61222184 61230670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03232 61 935 Eukaryotic Initiation Factors Gene Family AT5G43810 35.565 4.74e-170 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03232 K11593 - gmx:100820376 1627.45