Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03229 ATGCCAGATGGTATCTCTATTATGGTTTATTGGAATAGAAATATTGCTAAAACAGCGGCAGACTTAGAATTTGAATGTGTGGGACCTAGGGTTTTTCCTGTCAAGACTGATGTTAACCTTGGACAACTTAAAAGAATTATTACAAGGAAAATTAGGTTGCGACCAAATGAACAGATTGGTAGAATCTTCAATAAGTATCCACAAAAGAGCAATAAGTCTGGTCAAAGGGATGTTGATGATAATGGAGAAGATGAAGGTGATGTTGAGGGGGGTTTTAATGTAGGTGTCGATGATGCACCACCATCACACCCTGCTGTGAAAACTGAAGCCACAACTTCACAGCTTCATACTTCGATTTTCCACTACCCTTTAATGAGAGGAAATCTTCACAACACTATGCATCATCCCCATCACAGTCAACAACAAGGAGGGAGTCCAAGCTCTAGTAAAGTTGAAGCCATAAAAGCCAAAATCACTGCTCATCCTCAATACTCTAGTCTTTTAGAAGCTTACATGGATTGCCAAAAGATAGGAGCTCCGCCGGAAGTGGTGGCGCGTTTGGTTGCGGCAAGGCAAGAGTTTGAGGCACGGCAAAGATCTTCAGCTGGCACAAGGGAATCTTCCAAAGACCCAGAACTTGACCAATTCATGGAAGCTTACTACGACATGCTTGTGAAATACAGATACAGATAG 693 0.4199 MPDGISIMVYWNRNIAKTAADLEFECVGPRVFPVKTDVNLGQLKRIITRKIRLRPNEQIGRIFNKYPQKSNKSGQRDVDDNGEDEGDVEGGFNVGVDDAPPSHPAVKTEATTSQLHTSIFHYPLMRGNLHNTMHHPHHSQQQGGSPSSSKVEAIKAKITAHPQYSSLLEAYMDCQKIGAPPEVVARLVAARQEFEARQRSSAGTRESSKDPELDQFMEAYYDMLVKYRYR* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03229 230 MobiDBLite consensus disorder prediction 62 112 - -
Rops11g03229 230 SMART KNOX1_2 152 196 IPR005540 GO:0003677|GO:0005634
Rops11g03229 230 MobiDBLite consensus disorder prediction 129 152 - -
Rops11g03229 230 MobiDBLite consensus disorder prediction 134 149 - -
Rops11g03229 230 Pfam KNOX1 domain 153 195 IPR005540 GO:0003677|GO:0005634
Rops11g03229 230 Pfam KNOX2 domain 208 228 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03229 Rops-Chr11 61171955 61185992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03229 102 228 Homeobox Transcription Factor Family AT4G08150 56.250 2.37e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03229 - - gmx:100800822 205.297