Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03227 ATGGAGACTAGGAGAAAAACTATCCTGTGTTTATTCATGACCATCACAATGGGGTATTACAGAACTGAAGCCAGAGACCCTGTGCTACACAGGGTTGGAGGAGGAAGGTTTACCTGGGCACCAAAAATTAACTTTACAAAGTGGGCAAGTCATGAGCATTTCTACAAGGGTGATTGGTTATATTTCGGTTTTGACAAGCACATCTATAATGTTCTGGAAATGAACAAAACAAATTATGAGAAATGTATTGAATCAGGCTTCATAAACAACATCACAAATGGAGGGAGAGATGTTTTCCAACTCTTAGAAGCTAGGACATATTATTTTCTCAGTGGCAGAGGCTTCTGCTTTCTAGGAATGAAGGTTGCAATAAATGTTGTTGAACAACCTGCACCTGCACTAGCAGTATCACCAGCAATAGTAGACAAGGCATTTGCAACTAGTAGAATACGTCATACTAAACTGCTTGTGCTTTCGGCCTCAGCTTTGGCGTGGACCTTCATATAG 507 0.4063 METRRKTILCLFMTITMGYYRTEARDPVLHRVGGGRFTWAPKINFTKWASHEHFYKGDWLYFGFDKHIYNVLEMNKTNYEKCIESGFINNITNGGRDVFQLLEARTYYFLSGRGFCFLGMKVAINVVEQPAPALAVSPAIVDKAFATSRIRHTKLLVLSASALAWTFI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03227 168 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Rops11g03227 168 Pfam Plastocyanin-like domain 39 120 IPR003245 GO:0009055
Rops11g03227 168 PANTHER BLUE COPPER PROTEIN 30 135 IPR039391 GO:0009055
Rops11g03227 168 Gene3D - 28 129 IPR008972 -
Rops11g03227 168 FunFam Lamin-like protein 26 129 - -
Rops11g03227 168 SUPERFAMILY Cupredoxins 30 127 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03227 Rops-Chr11 61138935 61139546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03227 29 133 Phytocyanin Superfamily AT2G27035 59.048 1.44e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03227 - - lang:109342762 248.44