Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03209 ATGCCTACCGCCGAATCTTCATCAGCTTCCGGCCAAACCATATGTGTTACCGGTGCCGGTGGCTTCATCGCCTCTTGGATGGTCAAGCTCCTCTTGGAAGAAGGCTACATTGTCAGAGGAACCGTGCGAAACCCAGATGAGCCAAGAAATGGGCACTTGAAGGAGTTGGAAGGAGCCTCAGAGAGGCTAACTTTGCATAAGGTTGATCTCCTTGATCTTCAATCTGTTAAAGAAGTCATTCAAGGCTGTGATGGTGTCTTTCACACTGCTTCTCCCGTCACTGATAACCCCGAAGAAATGGTGGAGCCAGCGGTGAATGGAGCCAAGAATGTGGTCATAGCATATGCAGAAGCAAAAGTACGACGTGTGGTGTTCACCTCATCAATTGGCGCCGTCTATATGGACGCCAATAGGAGTGTTGATGTTGTTGTTGACGAGTCTTGTTGGAGTGATTTAGAGTATTGCAAGAAAACCAAGAACTGGTATTGTTATGGGAAGGTTGTGGCTGAACAAGCGGCATGGGATACGGCAAAAGAGAAAGAGGTTGACTTGGTTGTGGTCAACCCAGTTTTGGCTTATGTGCATGTTAGGGATGTGGCATTAGCCCACATACTTGTTTATGAGAAGCCTTCTGCTTCTGGTCGATACATATGTGCTGAAAGTTCACTGCATCGAGGAGAGCTAGTTGAAATTCTTGCCAAGGTGCAGAGGGCTGTTTGCATGATTTCCAACTCCACAACACAAGGGAGCACCATGTTTTGCAAGTCTCATGGTGGTGGGAAGTATTGCTCATTCGCGGGTTGCACCAAGAGTGCACGTAGTGATGCTGATGGTTGTGTTCAGCATGATGGGGGGAGTTCGAAGTTTGGAATTAGGACACTTCGTTTGACTACCAGACAAACGTTTCAGCTCCATGGTGTTGTCAAGAAGGACCTTAAAACCGTGATGAGCACCATTAGCAGAAATATGGGTTCAAGTCTTGGTGCATGTGGTGACCTAAACAGAAATGTACTTGCTCCAACTGATTTATGGACCCCAGAAGCCACCATGGTTGTTGCACCAACATACCACAGTGCATGCAATGCATGCAGGAACGTAGGAGATGGCTACCGCCTCCCCCAGTGTTGCAACTCAACCTCTTTTGTGGTGTATTATAAGAAACGAACGACCCCACATGACTCACCCTCATGCGACTTGTGTCGAAAAAAAGAAAGCAGGTTCTCAAGACTCCAAGCTCCTCAAAGGAGGGACAAGGTGATTTGTTTGTTTAGAAGGAAAGAGGCCCATCCATTTTGGTCTATCACGTGCAAACATAAAAAGAAGGAAAGTGATGGGCATAGGAGATAG 1347 0.4707 MPTAESSSASGQTICVTGAGGFIASWMVKLLLEEGYIVRGTVRNPDEPRNGHLKELEGASERLTLHKVDLLDLQSVKEVIQGCDGVFHTASPVTDNPEEMVEPAVNGAKNVVIAYAEAKVRRVVFTSSIGAVYMDANRSVDVVVDESCWSDLEYCKKTKNWYCYGKVVAEQAAWDTAKEKEVDLVVVNPVLAYVHVRDVALAHILVYEKPSASGRYICAESSLHRGELVEILAKVQRAVCMISNSTTQGSTMFCKSHGGGKYCSFAGCTKSARSDADGCVQHDGGSSKFGIRTLRLTTRQTFQLHGVVKKDLKTVMSTISRNMGSSLGACGDLNRNVLAPTDLWTPEATMVVAPTYHSACNACRNVGDGYRLPQCCNSTSFVVYYKKRTTPHDSPSCDLCRKKESRFSRLQAPQRRDKVICLFRRKEAHPFWSITCKHKKKESDGHRR* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03209 448 Gene3D - 192 257 - -
Rops11g03209 448 Gene3D - 3 191 - -
Rops11g03209 448 Gene3D Sulfite Reductase Hemoprotein;Domain 2 274 353 - -
Rops11g03209 448 CDD FR_SDR_e 15 234 - -
Rops11g03209 448 FunFam Dihydroflavonol reductase 11 193 - -
Rops11g03209 448 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 286 330 IPR036136 GO:0016491
Rops11g03209 448 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 287 318 IPR005117 GO:0016491
Rops11g03209 448 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 238 - -
Rops11g03209 448 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 235 IPR036291 -
Rops11g03209 448 Pfam NAD dependent epimerase/dehydratase family 14 191 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03209 Rops-Chr11 60450461 60452027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03209 11 234 Monolignol Biosynthesis Gene Families AT1G80820 61.089 2.15e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03209 K09753 - gmx:100796771 400.593