Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03207 ATGTCTGTAATTGTAAGAGACGAGGAGGGGAAACTACTACTACTCAGCAAAGGTGCTGACAGTGTAAATCTGAATATAGTATATGATATCTTAAATACACCACGTGAGTATCATTTCCATTCGGTCTCAGATGAATATGCTGATGCTGGTTTGAGAACCTTGATACTTGCATATCGTGAACTTGATGAGGAAGAGTACAATCTATTCAATAAAGAATTCATGGAAGCCAAGAACTTAGTGAGTGCAGATCGGGAACATATTGTAGAGGAAATATCAGAAAAGATTGAAAAGGATTTATCTATGATGTCCTATTTACAGTTAAGGGGCAAATTAAGGCATTATCAAGGTCCCATCCTAGTGCTTCCTTTACAATACATCAGCAGGGTCTACAGTACACTATCCATGCTTCCTTTGAAAATAATGGCTATCATGTTTCCTACTCCTTCCTCTTTTTGCAAACTTCACACTTACTACTTGAGGGGGTGTGGTAGTTCCAACTTTGTATGA 507 0.3807 MSVIVRDEEGKLLLLSKGADSVNLNIVYDILNTPREYHFHSVSDEYADAGLRTLILAYRELDEEEYNLFNKEFMEAKNLVSADREHIVEEISEKIEKDLSMMSYLQLRGKLRHYQGPILVLPLQYISRVYSTLSMLPLKIMAIMFPTPSSFCKLHTYYLRGCGSSNFV* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03207 168 Gene3D - 1 105 IPR023299 GO:0000166
Rops11g03207 168 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 102 - -
Rops11g03207 168 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 74 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03207 Rops-Chr11 60415825 60416751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03207 1 113 Primary Pumps ATPases AT1G68710 54.310 8.01e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03207 K01530 - gmx:100777629 139.813