Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03204 ATGGTTGGAGTAAACCAGAGGGTCATTGAGGAACAACTTGAAAGGAAGAAGGACGAGTATCAACAACATGAGGAGCTTGCTAAGATTGCTAAACTGTATGAATCAAATGAGGTTGCATTTAAGATAAAGTTGTTTACAGGATCTTCACTGAAAGGTGTTGCTTTAAATGGAGCCATAAACCTAAAGGCAACTTGGGTGATACTTGACAGGCAAATGAAGAAAGATGAGGAGTTTTTTCTGCAGAAGCTTTCTTGTGGTATATCTATATTAAGGCGTAAAAATAGGATAAAACGCCTAAGAGGACCTCTAGTTCACCCTGTTGAAATACAATGTAACAGCCATGAAATAACCAATGAAAGTATTCCAGAAATTCCATATGAAGATCTTCCGAGCATTGATGGTGTTCCCAAGAGTCCAAACAAAGTTAATGGGGAGAATCAGCTAAACTGCGGGACCTGTGAGGAAGAGGGGTGCTCAACATTTACCACTAACATTAATGATGAAACATGTCAGACAAGTACTGATCACCCGAGCATGGATGCAACGGACATAAAAAGTAACCAAATGATAGGAAAAATAGGAGATAAGCAATGCCAGGATCAAGAACAGATACAAAGCATGCTCCATGAGGATGAGAGGGACACAACACTTGTGATTGACAATGATAAAAAAACTGCTGAAGAAATAGCTGATCAACCTAGCCAGGATGTAGAGAAGACACACCATGATGAGGAGTGGGACTTGAGGCATCCAACTAAGAGCAAAGAAATGATTGATCAAACAAAAGATGACCAGCTGAGCCAGAATCAAGCACAACAGACACAGAGAATTTCCCATGAGGGTATATTGGATGGACAGCAAGAGAAAAGCATTTTGGAAAACTCAATGTGCTCTATATGCTTGATCTGCAAAACTAGAAGACCTAATATTGAATGGCAAAAGGAATTCACTTACGAAGAACTCCAAGCAGCCACAGAAGAATTTTCATTGAAGAACTGTCTCTCTGAAAGTGCATATCCATTTTCAACTTTCAGAGGCCAGCTGGATGGAGAGCTGAAAATAGTAGTTAAGCAGCATGAAATAACAAACAATCAAGCAATGGAAAAAATAAAGTCAGAAGTACATACCATCATCAAAGCTAGACATAAGAATGTGGTCATGCTATTGGGTTCATCTACAAAAGAACGTTTCCTGTTGGTTGTATATGAGTATGCATGCAATGGTTCACTTGACAAGTATCTATCAAGGGAAAGCTGCAGACCATTGACCTGGAGTGAAAGGGTGAGAGTGGCAATAGGTCTCTCCAGAGGCCTAAAGCATCTACATGACAATAACATTATTCATGGCAATATAAAACCAAGTAATATTCTTCTGACGCATGACTTCAAACCACTGCTTGGAGATTTCGGCTTTGGGAAAAAACTTGAATTTAAGTCCTACAAAAGTAAAAACATAGGGAATTTGGAGTACATAGCACCAGAGTATCAGGTGAAGGGGAAACTATCAACTAAGACAGATGTATACTCGTTTGGTGTGGTTATTTTAGAGTTGATCACTGGACGAAGGGCTACAGATGAAATATCAGGAGAGAAAAGACTTGTTGAATGGGCAAAGCCTCTTCTTGGAGGAAAGAAATACTCAGAGTTGGTGGATCACATAATAAGCAACTCGTATGAAGATGACCAACTTCGTTGGCTGGTACAAGTAACAGCAGAATGTCTCAAAAAGAATCCTAAGGAAAGATTATCCATGAATATGGTTGTTTCTGCATTACAAGGCATAGCAGATAATGATCAATGCCACATTACAGAAGACTTTACTTCAGCTACATCATATTCAAGATATGTGCCTGACATGAATGGTTCACAAATTCTGGCTCTATCTACAGTACAAGGCACAACAGACAGCAAACAGTGCTACATGACAGAAGACTTTACTCCACCTGCATCAGATTCAAGATTTGCGCTAGACATAAATGGTTCACAAGGTCCAACAGAAGTTGATCACCCAAGTCAGAAAGAGGAACAGATAGAGAGCAGCTCCTTACGGGAGGAAAGGAGGTTAAGACTAAGAGTTGAAAATGATCACATTTACACGATAGGCCAGAGAAACTCTGATACCTTGAACCAGATTGAAGAGCAGATGCAGAGAATGCCCCAAGGGGGGGAGAGGAGCTCAGGAAAGATGATAATAAATGACCAGCAGAATGAGTTTGAAGAGCATATGAAGAGCACCCTCTCTGGGGAGGGCATAACACAGAAAATTAGCATTGACCACATGATAGGTGAGACAAAAGTTGACCATCTGAGCCAGGATCAAGAAGAGGAGAGGAGCTTTGTTCAAATGAAGAGAGGCTTAAGACCAGCACCTATTAGTGGAATGACAGATCAAACAAAATCAGATCAGCTGATCCAGGATAAAACACAACTGCATAGCAGCTCCAATGAGAATTTACTGGATGGACATCATGGTGAAATCATTTTGGAGAATTCGAAATCCCCTGCATGCTCTATTTGCAAAAGTAAACGTCCAAACATTCCATGGCTAAAAGACTTTACTTGTGATGAACTCCTAGAAGCAACAGAAGGATTTTCAGTTAAGAACTCTCTATCTGAAAGTGAAGATGGGCCTACTTTCAAAGGCCTGTTAGAAAGTAAGGTGAAAATAGTTGTTAAGAAATATCAAATTACTAGGTCCGAGGAAGAGAAGATATTCAAGTCAGAAATCCAGTTGCTCACTGATGCTAGACATAAAAATGTGGTCATGCTGTTGGGCTTATGTATACATAAAAGCCAATTGATGATTGTGTATGAGCAAGTATGCAATGGTTCTCTTGACCACTACCTATCAAGAGGAAGTTTCCAGTCATTGACTTGGAGGGAAAGGATGAAAGTAGCAATAGGTACTGCCAGAGGCTTAAAGTACCTACATGGGAATAACATGATTCATGGGAATATAAAAGCTAGTAACATTCTTCTAACACATGACTTCGAACCGCTGATTGGAGATTTTGGCTTTGGAAAAGTGAAACTTGAAACAAAGAAATCCTACAAAGAGAAAAATGTAAGAGATTCTGGATATACAGCACCTGAGTATTTGGAAAGTGGGAAACTATCAACTAAGGCAGATGTGTACTCCTTTGGAGTGGTTCTTTTAGAGCTGATCACGGGCCGGAGGGCCATGGATAAACTACCAGGAGGAAAAAGCCTTGTTGGATGGGCAAGGCCCCTACTGCCAGGAAAGAAGTACCCACAGTTAGTGGATCCGAAAATCAGTAACTCCTATGAAGAAGAAGACCTTCTCTGGTTGATCCCAGTAATAGAACAATGTCTCAGAAAGAATCCCAAGGAAAGATTTACAATGAATATGGCTGTATCTGCATTACAAGGCATAGCAGAATCAGAAGAGTGTCGTGTAATTGAAGATACTTCTCCAGAAAAGTCAAGTTTACCACATGATGAGCCTGCCATGACTAGTTCACAAGGTCAAATGAAGGATGATCCGGAGAGCCGGGAGGAAGAATGGATTGATAGAAAAATATATGAGGAGGAGAAAAGTTTCAGATTAGCAATCAAAACTAATAGCATGATAGATCAGAATGAAGCTGATCAGCTGAAACAGGTTGGAGAAGAGATGCAGAGCAGGCCTTCTAGGGAGGATATGTCCAGAGTGACAGTCACCGGTAATCACATGATTGAACAGATAAACCCTGATCAACAGATCCAGGAAAAACATCATATTAAGGAAAGCTTCCCCGTAGAAGAGATAGATGCAAAAGTGGATAAGCAACAAAAGGTGAGCAAGGATAAAAAACAAATGCAAGGCAGCTATGATGAGGGTTTATTGAATGAGAATCAAGGTGAAGACGAAACCATTTTGGAGAATTCGAAGTCTTCTGTATGCTCAATCTGCAAAAGTAAACGACCAAATAATGGACGGCAAAAGAAATTTACTTATGAAGAACTTCAAGCTGCTACAGAAGGATTTTCAATTAAGTATTCTCTATCTGAAGATGAATATGGACCTGCTTTCAGAGGCCAGCTAGATAATAAGTTTAAAATAGTTGTTAAGCACCATCAATTCACAAGCTTGCAGGAACAGAAGATGTTTATGTCAGAAGTCCAGTTGCTTAAAAATGCTAGACATGAAAACGTGATCATGTTGTTGGGTTCATGTATACGAGAAAAACAATTGCTGATTGTCTATGAGCATGCATGCAACGGTTCACTTGACCAGTATTTATCAAGGGCCAGTGGTGGATCATTGACTTGGAGGGAAAGGGTGAAAGTTGCAATAGGTGTCTCCAGAGGTCTAAAGTATCTACATGAGAATAACATAATACATGGAAGAATAAAACCAAGTAACATTCTTCTAAATCATGAGTTTAAACCACTGATTGGAGATTTTGTCTTTGGAAAAGAAAGACATAAATTGAAGAATGGAAGCAAGGATAAAAGTATGCTGAATTGTGGATACACTGCACCAGAGTGTCAGGAGGGTGGAAAACTATCAACAAAGGCAGATGTATACTCTTTTGGGACAGTTCTTCTAGAGTTGATCACCGGCTGTATGATTTCAAATAAAATATCAGGACAGAAATATCTTATTGAATGGGCAAGGCCACTTCTTGGAGGAAGGAAGTACCTACAGTTATTGGATCCCAAAATCAGCAACTCCTATGATGAGCAAGAACTTGCTTCATTAGTCCTCGTAGCAGAAAAGTGTCTCAGAAAGAATCCTAAGGAAAGGTTCACGATGAATATGGTTGTCTCTACAATGCCGAGTATAGATGATAGCAATGACATCCATGTAACTGAGGACTCTTCATCAGAGAAATCATTTGTAGGATGCAGTGCTTCAGATGTAACAAGCTCAAAAGGCGAGGAGGAATCGCTGGAAGAAGAAGATTTAGGTACAGAGATTAATGAAGAAAAAGAGGACAACATAACTTGTAGTAGAAGCAACAGTGCAACAGAAATTGGCCAAGAGAGTGATAGCTACACAGCCTATGGTGAAAGTTGCAAGGAAGCAAAGGGAAAAGAAAGCACAAGCACCAAGGCATGTCAAAAATGGGAAAGGTGCATATCTTATGGTGGAGCTAGACACTTTTATCTTAAAGGGGCTCAAGAATATTCAGCATGCCAAGAATTTTTTAGCTTGTGTAATTCAACTTGA 5175 0.3985 MVGVNQRVIEEQLERKKDEYQQHEELAKIAKLYESNEVAFKIKLFTGSSLKGVALNGAINLKATWVILDRQMKKDEEFFLQKLSCGISILRRKNRIKRLRGPLVHPVEIQCNSHEITNESIPEIPYEDLPSIDGVPKSPNKVNGENQLNCGTCEEEGCSTFTTNINDETCQTSTDHPSMDATDIKSNQMIGKIGDKQCQDQEQIQSMLHEDERDTTLVIDNDKKTAEEIADQPSQDVEKTHHDEEWDLRHPTKSKEMIDQTKDDQLSQNQAQQTQRISHEGILDGQQEKSILENSMCSICLICKTRRPNIEWQKEFTYEELQAATEEFSLKNCLSESAYPFSTFRGQLDGELKIVVKQHEITNNQAMEKIKSEVHTIIKARHKNVVMLLGSSTKERFLLVVYEYACNGSLDKYLSRESCRPLTWSERVRVAIGLSRGLKHLHDNNIIHGNIKPSNILLTHDFKPLLGDFGFGKKLEFKSYKSKNIGNLEYIAPEYQVKGKLSTKTDVYSFGVVILELITGRRATDEISGEKRLVEWAKPLLGGKKYSELVDHIISNSYEDDQLRWLVQVTAECLKKNPKERLSMNMVVSALQGIADNDQCHITEDFTSATSYSRYVPDMNGSQILALSTVQGTTDSKQCYMTEDFTPPASDSRFALDINGSQGPTEVDHPSQKEEQIESSSLREERRLRLRVENDHIYTIGQRNSDTLNQIEEQMQRMPQGGERSSGKMIINDQQNEFEEHMKSTLSGEGITQKISIDHMIGETKVDHLSQDQEEERSFVQMKRGLRPAPISGMTDQTKSDQLIQDKTQLHSSSNENLLDGHHGEIILENSKSPACSICKSKRPNIPWLKDFTCDELLEATEGFSVKNSLSESEDGPTFKGLLESKVKIVVKKYQITRSEEEKIFKSEIQLLTDARHKNVVMLLGLCIHKSQLMIVYEQVCNGSLDHYLSRGSFQSLTWRERMKVAIGTARGLKYLHGNNMIHGNIKASNILLTHDFEPLIGDFGFGKVKLETKKSYKEKNVRDSGYTAPEYLESGKLSTKADVYSFGVVLLELITGRRAMDKLPGGKSLVGWARPLLPGKKYPQLVDPKISNSYEEEDLLWLIPVIEQCLRKNPKERFTMNMAVSALQGIAESEECRVIEDTSPEKSSLPHDEPAMTSSQGQMKDDPESREEEWIDRKIYEEEKSFRLAIKTNSMIDQNEADQLKQVGEEMQSRPSREDMSRVTVTGNHMIEQINPDQQIQEKHHIKESFPVEEIDAKVDKQQKVSKDKKQMQGSYDEGLLNENQGEDETILENSKSSVCSICKSKRPNNGRQKKFTYEELQAATEGFSIKYSLSEDEYGPAFRGQLDNKFKIVVKHHQFTSLQEQKMFMSEVQLLKNARHENVIMLLGSCIREKQLLIVYEHACNGSLDQYLSRASGGSLTWRERVKVAIGVSRGLKYLHENNIIHGRIKPSNILLNHEFKPLIGDFVFGKERHKLKNGSKDKSMLNCGYTAPECQEGGKLSTKADVYSFGTVLLELITGCMISNKISGQKYLIEWARPLLGGRKYLQLLDPKISNSYDEQELASLVLVAEKCLRKNPKERFTMNMVVSTMPSIDDSNDIHVTEDSSSEKSFVGCSASDVTSSKGEEESLEEEDLGTEINEEKEDNITCSRSNSATEIGQESDSYTAYGESCKEAKGKESTSTKACQKWERCISYGGARHFYLKGAQEYSACQEFFSLCNST* 1725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03204 1724 MobiDBLite consensus disorder prediction 1600 1635 - -
Rops11g03204 1724 FunFam Proline-rich receptor-like protein kinase PERK8 290 404 - -
Rops11g03204 1724 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 940 1139 - -
Rops11g03204 1724 SUPERFAMILY Protein kinase-like (PK-like) 847 1128 IPR011009 -
Rops11g03204 1724 Coils Coil 6 30 - -
Rops11g03204 1724 Gene3D Transferase(Phosphotransferase) domain 1 406 614 - -
Rops11g03204 1724 Gene3D Transferase(Phosphotransferase) domain 1 940 1150 - -
Rops11g03204 1724 Gene3D Transferase(Phosphotransferase) domain 1 1406 1620 - -
Rops11g03204 1724 SUPERFAMILY Protein kinase-like (PK-like) 1313 1591 IPR011009 -
Rops11g03204 1724 MobiDBLite consensus disorder prediction 643 682 - -
Rops11g03204 1724 ProSiteProfiles Protein kinase domain profile. 1329 1596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03204 1724 Gene3D Phosphorylase Kinase; domain 1 304 404 - -
Rops11g03204 1724 MobiDBLite consensus disorder prediction 668 682 - -
Rops11g03204 1724 FunFam Proline-rich receptor-like protein kinase PERK8 1291 1404 - -
Rops11g03204 1724 MobiDBLite consensus disorder prediction 1250 1275 - -
Rops11g03204 1724 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 405 604 - -
Rops11g03204 1724 Pfam Protein tyrosine and serine/threonine kinase 868 1126 IPR001245 GO:0004672|GO:0006468
Rops11g03204 1724 Pfam Protein tyrosine and serine/threonine kinase 1333 1592 IPR001245 GO:0004672|GO:0006468
Rops11g03204 1724 Pfam Protein tyrosine and serine/threonine kinase 350 591 IPR001245 GO:0004672|GO:0006468
Rops11g03204 1724 SUPERFAMILY Protein kinase-like (PK-like) 312 607 IPR011009 -
Rops11g03204 1724 MobiDBLite consensus disorder prediction 1609 1625 - -
Rops11g03204 1724 FunFam Proline-rich receptor-like protein kinase PERK8 826 939 - -
Rops11g03204 1724 ProSiteProfiles Protein kinase domain profile. 328 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03204 1724 ProSiteProfiles Protein kinase domain profile. 864 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03204 1724 PANTHER OS01G0253100 PROTEIN 763 1136 - -
Rops11g03204 1724 MobiDBLite consensus disorder prediction 227 253 - -
Rops11g03204 1724 MobiDBLite consensus disorder prediction 1139 1173 - -
Rops11g03204 1724 Gene3D Phosphorylase Kinase; domain 1 829 938 - -
Rops11g03204 1724 Gene3D Phosphorylase Kinase; domain 1 1291 1404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03204 Rops-Chr11 60327540 60344645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03204 316 591 Trihelix Transcription Factor Family AT5G38560 38.754 2.35e-54 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Rops11g03204 PK_Tyr_Ser-Thr 3.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03204 - - gsj:114401847 2127.44