Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03193 ATGTTGAAAATAGAAAAGATATCATCCGGGAGGGATGGTATTGAGAAGGGTATCGAAGACATCCCATTTGAGTATGAGAATGAAGATAATGAATATGAATATAGTGGTGAGGAGGATGTGCAGGAAACCGTTGTAGGGGAATATGATGAAGGTGTTTTTTTAAGTGGTGATGATGAAGAGGAGGAAGTAGATGATGTTGATGATGAAGAATTTAATGAGGAGAATGTTGCAAGTGATGAGGAAGGTAGGGTGATGAATGTTGATAGTGTTGGCGACATTGGTAAATTTGACTTAGGCAGCTTTGGTGCAGATGAAGTAGTGAATGTGAATTTCATTAGTGTGGAGGTGGCGTGCTTTTTCTATACTTTATATGCTAGGGTGAAAGGGTTTTCTGTAAGAAAATCGAAGATACATAAGGACAAAAATGGTGTCATTGTGCAACAATGTTTTGTCTGCAACAGGGAGAGATTTAAGGAGGACAAAGGATTGCGCATTGAACAACGTAAGAGGAAATCTAGAAAGCAAACAAGATGCGGGTGTAAAGCTCAATTGAGGGTGCATGTAGATAAGGAATCGATGCGATGGTATATGCATTTTCTTTGCTACATAGTAGTTGTCGATCAACTTCACTGGGATGAAGCCGTTTTGGTTTTTCTATATAAGGATCTTTCTCATTGCACTGAAACAAGTTTCAAAACTGTTGAAAACAAGCACAAATTTGTGGTTTTAAAGGATTTGAGGAAGCTTTGGGAGAAGCACGATCCTAATCTTCCATGGGATAAGGGATATTACAATGAATCCAAGACATTGCTAATGGATGATTGTCGTTATAAGGGATTGCTTAATCCTGTAAATAAACTAGTTTTTCCCTCTTTTCTTGTTCTAGCAGGCTTTTTTTAG 900 0.38 MLKIEKISSGRDGIEKGIEDIPFEYENEDNEYEYSGEEDVQETVVGEYDEGVFLSGDDEEEEVDDVDDEEFNEENVASDEEGRVMNVDSVGDIGKFDLGSFGADEVVNVNFISVEVACFFYTLYARVKGFSVRKSKIHKDKNGVIVQQCFVCNRERFKEDKGLRIEQRKRKSRKQTRCGCKAQLRVHVDKESMRWYMHFLCYIVVVDQLHWDEAVLVFLYKDLSHCTETSFKTVENKHKFVVLKDLRKLWEKHDPNLPWDKGYYNESKTLLMDDCRYKGLLNPVNKLVFPSFLVLAGFF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03193 299 Pfam FAR1 DNA-binding domain 120 199 IPR004330 -
Rops11g03193 299 Gene3D - 192 295 IPR023214 -
Rops11g03193 299 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03193 Rops-Chr11 59931812 59933433 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops11g03193 FAR1 4.7e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03193 - - lja:Lj2g3v1102910.1 122.094