Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03187 ATGGTGTTTCTTGTGGCCAGTTTCCTTGCCTTCTTTGTGGACCCTCTTTACTTCTTCCTCCCCACCATTGGAGGCCCTTCTTGCTTACAAGCAGATCGCAAAATGAGCATTGTGGTCACCATTATTCTCTCTTTCACAGACCCCTTTTATGTCTTCCACATGGTCATGAAGTTCTACATTGCCTTTGTTACACCCAATTCTAGAGTCTTCGACCGTGGTGAGCTCGTCATGGATGCACGTGAAATCACCATGCATTATTTGAAGTTCGATTTTGTTATTGACCTTACAACCACCATTCCACTACTGCAACACCGTGGGAATAACCACAAAAGTTAG 336 0.4435 MVFLVASFLAFFVDPLYFFLPTIGGPSCLQADRKMSIVVTIILSFTDPFYVFHMVMKFYIAFVTPNSRVFDRGELVMDAREITMHYLKFDFVIDLTTTIPLLQHRGNNHKS* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03187 111 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 103 - -
Rops11g03187 111 SUPERFAMILY Voltage-gated potassium channels 2 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03187 Rops-Chr11 59780304 59780639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03187 2 103 Ion Channels AT5G14870 52.941 6.51e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03187 K05391 - gmx:100802812 153.295