Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03173 ATGGGCAACTGTTGCTCCCAAGGCAACGAGGGCGATGATGCCCCGGCCGCCACAGCGGTCGAGACAAAGGGAGAAGCCAACCAACAGAGCAACAACAACCATGAAGGAGGCAGTAGTAATAGTAATAGAAATAATAATAATAATAATAATGACACATCAACAAACCCTACCACACCACCACCACCAGCATCAAAGCCACCACCCTCAACACAACCACCACCAACATCAAAGCCCACCACCAAACAAGCCCCTATTGGTCCTGTCCTAGGAAGACCAATGGAGGATGTGAAAGCCACATATTCCATAGGGAAGGAGCTAGGGAGAGGACAATTTGGTGTCACACATTTATGTACCCACAAAGTCACTGGTGAGCAATTTGCATGCAAAACCATTGCCAAGAGAAAACTTGTTAACAAAGAGGATATAGAAGATGTTAGAAGAGAGGTTCAAATCATGCACCATCTCACAGGTCAACCTAATATTGTGGAACTAAAGGGTGCATATGAGGATAAACAATCTGTTCATTTGGTCATGGAATTGTGTGCTGGTGGTGAACTTTTTGATCGTATCATTGCAAACGGACATTACACTGAACGTGCTGCAGCTTCATTGTTAAGAGCCATAGTGCAAATTGTTCATACTTTTCATTCCATGGGTGTTATTCATAGAGATCTTAAGCCTGAGAATTTCCTCTTGTTGAATAAGGATGAGAATGCACCTCTCAAAGCCACAGATTTTGGTCTATCCGTATTTTACAAACAAGGAGAAATGTTCAAAGACATTGTTGGTAGTGCATATTACATTGCACCAGAGGTTTTGAAGAGGAGATATGGGCCAGAAGTTGACATTTGGAGTGTTGGTGTCATGCTATACATTCTTCTATGTGGTGTCCCTCCATTTTGGGCAGAATCTGAACATGGTATATTCAATGCCATCTTAAGAGGTCACATTGACTTTACAAGCGATCCATGGCCTTCAATTTCACCAGCAGCAAAAGATCTTGTAAGGAAAATGTTGAATTCAGATCCCAAACAGAGATGA 1041 0.4246 MGNCCSQGNEGDDAPAATAVETKGEANQQSNNNHEGGSSNSNRNNNNNNNDTSTNPTTPPPPASKPPPSTQPPPTSKPTTKQAPIGPVLGRPMEDVKATYSIGKELGRGQFGVTHLCTHKVTGEQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIANGHYTERAAASLLRAIVQIVHTFHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGEMFKDIVGSAYYIAPEVLKRRYGPEVDIWSVGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPAAKDLVRKMLNSDPKQR* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03173 346 ProSiteProfiles Protein kinase domain profile. 100 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03173 346 Pfam Protein kinase domain 100 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03173 346 Gene3D Phosphorylase Kinase; domain 1 102 186 - -
Rops11g03173 346 CDD STKc_CAMK 100 346 - -
Rops11g03173 346 SUPERFAMILY Protein kinase-like (PK-like) 99 346 IPR011009 -
Rops11g03173 346 MobiDBLite consensus disorder prediction 55 80 - -
Rops11g03173 346 Gene3D Transferase(Phosphotransferase) domain 1 187 346 - -
Rops11g03173 346 ProSitePatterns Protein kinases ATP-binding region signature. 106 133 IPR017441 GO:0005524
Rops11g03173 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 94 346 - -
Rops11g03173 346 MobiDBLite consensus disorder prediction 1 92 - -
Rops11g03173 346 MobiDBLite consensus disorder prediction 22 54 - -
Rops11g03173 346 FunFam Calcium-dependent protein kinase 1 102 185 - -
Rops11g03173 346 SMART serkin_6 100 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03173 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Rops11g03173 346 FunFam Calcium-dependent protein kinase 5 186 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03173 Rops-Chr11 58999042 59002949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03173 1 346 EF-hand Containing Proteins AT5G12180 77.168 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops11g03173 Pkinase 3.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03173 K13412 - zju:107410708 525.013