Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03144 ATGGCAGCCTGCTTGAAGCCACCTAGGCTACCAAGCAATGAAGATGACTCTGTCGTACTCTTCTCAACTTCTAATTCTCCTGAAGGGTCCACCAGTCCTTCTTCTTTTTGTCATTCACCACCACCGGCACTGCATCAATTCAGAACTGCCTACAAACTCTGTGTCAGAAACCTCTCCTATACTTTGCACCCACATAAGACCACTCCCTTTCCATTTTGTCACTTGACTCAAAAACCCAGGCCTGTAAATATACTCAAGTCTGTCTCTTTTGATGCCAAAAGTTCTGAGATTGTTGCTGTTGTTGGTCCTAGTGGCACAGGGAAGTCTACTCTTCTCCGAATAATCGCCGGGAGGGTGAAAGATAAAGATTTTGATCCTAAAAGTATCTCAATCAATGATCAGCCTATGACTAGGCCAGATCAGTTGAGGAAGATATGTGGCTATGTGGCACAGGAGGACAATTTACTTCCTCTGCTAACCGTGAAAGAAACTTTATTGTATAGTGCCAAGTTTAGGCTAAAAGGAATGACACCAAAGGATAGAGAATTGAGGGTAGAAAGCTTGATGCAAGAGCTAGGCCTTTTTCATGTTGCAGATAGTTTTGTTGGGGATGAAGAGAATAGAGGGGTATCTGGTGGAGAGAGGAAGAGGGTATCAATTGGAGTTGATATGATTCACAATCCTCCAGTTTTACTCCTAGATGAACCAACATCAGGCCTGGACAGCTCTTCAGCTCTGCATGTAATTGAGCTTCTGTCATCAATGGTAAAAGCAAAGCAAAGGACAGTGATCCTGTCAATCCACCAGCCCAGCTATAGAATATTGCAGTATATTTCTAAGTTCTTGATCCTCTCTCATGGTTCAGTTGTTCACAATGGTAGCCTGGAATCACTAGAGGAAACCATAAGTAAATTGGGATTTCAAATTCCAATACAACTGAATGCATTAGAATTTTCTATGGAAATTATACGTAGGTTAGAAGATTCAAGTTCCAAATATGACACTTCCACCAATGAGGTAAAGGACCCTTTTCCAAACCACATGTGGCCAGACGAAGAAAACGGTGGAGTCCAATCACAAAATAACAGGTTACGTTTTGGCCATCTTTGTTACGTAAACTTGGTGGAGATACTCTTTCTTTGCTCAAGATTTTGGAAGATCATTTATAGAACAAAGCAGCTTTTCTTGGCCAGAACAATGCAAGCAGTAGTTGGTGGGTTTGGGCTAGGAAGTGTTTATATAAAGGTAAGGAAGGATGAAGGAGGAGTTGCAGAAAGGTTAGGTCTGTTTGCATTTAGTCTTAGTTTTCTCCTCTCTTCTACAGTTGAAGCACTTCCAATATACCTTCAAGAGAGAAGTGTTCTAATGAAAGAAGCCTCAAGGGGAGCCTACAAAATTTCCTCTTACATGATAGCCAACACTTTTGTCTTCCTTCCTTTCTTGTTTGTGGTATCTATACTCTTTGCAGTTCCTGTTTATTGGCTTGTAGGACTCAATCCTTCCCTTACTGCCTTCACCTTCTTCACTTTTGTGGTCTGGCTCATTGTGCTCATGGCGAGTTCTTTAGTACTCTTCTTAAGTGCTGTCTCTCCTGATTTCATTTCAGGGAATTCCCTCATCTGCACTGTACTTGGAGCCTTCTTCCTCTTCTCTGGATACTTCATCCCAAAGGAGAGCATTCCAAAATATTGGCTTTTCATGTATCATGTGTCCCTCTATAGGTACCCTTTGGATGCACTCCTCACAAATGAGTACTGGAATGTTAGAGATAAGTGTTTCTCACAACAAACACAAGGCTCCCAGTGTTTGATTACTGGCTTTGATGTGTTGAAGAGTAGAGGACTTGAAAAGGATCACAGGTGGATGAATGTGGGAATAATGCTAGGATTTTTTGTGTTCTATCGTGTGTTATGCTGGGTAATACTTGCTCGAAAGGCCTCCAAGACAACAATATAA 1956 0.4167 MAACLKPPRLPSNEDDSVVLFSTSNSPEGSTSPSSFCHSPPPALHQFRTAYKLCVRNLSYTLHPHKTTPFPFCHLTQKPRPVNILKSVSFDAKSSEIVAVVGPSGTGKSTLLRIIAGRVKDKDFDPKSISINDQPMTRPDQLRKICGYVAQEDNLLPLLTVKETLLYSAKFRLKGMTPKDRELRVESLMQELGLFHVADSFVGDEENRGVSGGERKRVSIGVDMIHNPPVLLLDEPTSGLDSSSALHVIELLSSMVKAKQRTVILSIHQPSYRILQYISKFLILSHGSVVHNGSLESLEETISKLGFQIPIQLNALEFSMEIIRRLEDSSSKYDTSTNEVKDPFPNHMWPDEENGGVQSQNNRLRFGHLCYVNLVEILFLCSRFWKIIYRTKQLFLARTMQAVVGGFGLGSVYIKVRKDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERSVLMKEASRGAYKISSYMIANTFVFLPFLFVVSILFAVPVYWLVGLNPSLTAFTFFTFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYHVSLYRYPLDALLTNEYWNVRDKCFSQQTQGSQCLITGFDVLKSRGLEKDHRWMNVGIMLGFFVFYRVLCWVILARKASKTTI* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03144 651 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 311 IPR003439 GO:0005524
Rops11g03144 651 Pfam ABC-2 type transporter 377 585 IPR013525 GO:0016020|GO:0140359
Rops11g03144 651 MobiDBLite consensus disorder prediction 16 38 - -
Rops11g03144 651 SMART AAA_5 94 296 IPR003593 GO:0016887
Rops11g03144 651 FunFam ABC transporter G family member 23 76 309 - -
Rops11g03144 651 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 636 - -
Rops11g03144 651 Pfam ABC transporter 85 238 IPR003439 GO:0005524
Rops11g03144 651 Gene3D - 70 344 IPR027417 -
Rops11g03144 651 Pfam ABC-2 type transporter 268 338 IPR043926 GO:0140359
Rops11g03144 651 ProSitePatterns ABC transporters family signature. 210 224 IPR017871 GO:0005524|GO:0016887
Rops11g03144 651 MobiDBLite consensus disorder prediction 15 38 - -
Rops11g03144 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 302 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03144 Rops-Chr11 58222160 58224357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03144 80 344 Calmodulin-binding Proteins AT2G36910 28.470 2.12e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03144 K05681 - gmx:100783883 1106.66