Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03139 ATGAACCACTATTCTTCTGGTCTCACAACTTTGACATGTGTCTTCTTGATCACTGCATCTTTTGTTATTGGAACTGCCATTGTTGATGGTGGGTTTATGTTGTTGTATAGAAGGTCTTGCAATTGCAAGTGTAATCAAATAGGGGTTTGGCACTCAGTGTTCTTTTCTCCTCTTAGAATTACTGAGCATGATCTACTTGTAGGGATGGATGAGAAAACCCCAAAGGGGAATGGTGGAGTTTTTGGCATAGTTTATGTGGTAAATTTACCTAGTGATGAATTAGATGCTGTAAAGAAGCTAGTCAATCTTGGAAACCAGTCTTCAAGAAATTTGAAATCTGAGATCAAGACATTAGCCAAGATCAGGCATAAGAATATTGTTAAAATTCTGGGGTTCTGCCACTCTGATGAGTACATTATGCTCATTTATGAACACTTGAATGAGGGAAGCTTAGGGGATTTAATTTCAAGTTGCAGTGGGGAGTTCGATTGA 492 0.3841 MNHYSSGLTTLTCVFLITASFVIGTAIVDGGFMLLYRRSCNCKCNQIGVWHSVFFSPLRITEHDLLVGMDEKTPKGNGGVFGIVYVVNLPSDELDAVKKLVNLGNQSSRNLKSEIKTLAKIRHKNIVKILGFCHSDEYIMLIYEHLNEGSLGDLISSCSGEFD* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03139 163 SUPERFAMILY Protein kinase-like (PK-like) 78 159 IPR011009 -
Rops11g03139 163 Pfam Protein kinase domain 79 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03139 163 Gene3D Phosphorylase Kinase; domain 1 67 145 - -
Rops11g03139 163 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 79 156 - -
Rops11g03139 163 ProSiteProfiles Protein kinase domain profile. 70 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03139 163 FunFam - 64 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03139 Rops-Chr11 58172324 58172815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03139 10 162 Receptor kinase-like Gene Family AT5G06940 43.137 9.82e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops11g03139 Pkinase 6.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03139 - - adu:107492922 218.009