Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03136 ATGTTATTCCCATTCGGGAGCCCGGACATACTGAACACCATAACATCATTAGGCTACGCAATCTTCCTGTTCCTGAATTCCGTGCAAATGGACTTCACACTGATCACAAAAACCGGCAAGAAAGCTTGGGTCATCGCTCTCCTCTCCCATTTCACACCCATAATCATAGGCAACACAATCGTGATTTCCCACTTTGCCTTTTGGGGCAAACACCTTGGTGTAGACGAAACCTTTGCCTTGCCTGTAGTTGTTATATCTCACAGTGGTTGTTCCTTCGCCGTCGTTGCCTCTCTTCTCAACGACCTCGAAATCCTCAACTCCGAACTCGGACGCCTAGCTCTTTCCTCCGCTTTTCTCAATGACCTTGCCGGTGGAATCGTCGCCGGTGTCGGCACTGCCATTATAAGCAGCATGAAAAGTGGAATGTCCATAATGATTACAAACCTGGTTCTGTTCCTTGGTTATTTGGTACTTATTCCCCTTATTGGGCGACCAGCTATGAGGTGGATTGTTAGAAACACTCCAGAAGGTAGACCAGTGAACAAGTTATATATCTACGCCATTATTATCACAATGTTTCTGTTGGGTCACTTGGCAGGAAGATTCAACCAACCATTTTTGGCTGGAGCTGTAATTTTGGGTCTTGCTGTTCCTGAAGGTCCTCCTTTAGGGTCTGAATTGGTTAACCAACTTGATCTATTTTCATCGTGGTTTCTGGTGCCTATCTTTGTTACATGTTGTACCATGAAGGTGGATCTTACCCAGTGTGGACCACCCGTATTGGTTTTGGTTATAACATGCTTCATTATTATGGTTCATTTAGTTAGGTTGTTGCAGTGTGTGGGAATTTGCCGGTACTGCAATATGCCCACCAGTGATGGTTTCTGCCTTGCTCTCATTTTGAGCTGCAAAGGTGTCGTTGACATCTGCTCCTTTGTCCTTGTCTACGATGGACTGAAACAAAGTCCACCAGCAATTGGTATTATGGTTATCTCGGTCTTGATCATGGGAACCATTTCACGGATTGGAGTGAAAGCTTTGTATGACCCTTCAAGGAAATACGCAGGCTATCAAAAAAGGAACATCATGAATTTGAAACATAACTCTGAGCTTCGTGTTGTTGCATGTGTTCACAAGCCAAGCCACGTGATTCACATCAAGAATTTCCTCCAACTTTGTTCTCCTGCACAAGACAATACTCTAGTGGTAGATGTGTTGCATCTCATGGAGCTAATTGGAAGAACCTCTCCCATTTTCATAGCACATCGCCTTCAACAAAAGGCTGTAGGGTCAACTCACAATTACTCTGGAGAACTCATAGTAACATTTGACCTTTTCGAACGTGAGTATGCAGGTTCAGCAACAGCTAACACCTACACAGCCATATCTCCAGCCACTTTTTTACATGAAGATGTTTGTTACCTTGCTTTGGACAAGAATGCATCGATTATAATCCTTCCATTTCATATAAGATGGACAGAAAATGGAGCAATAGAATCAGAGGACAACAAAATAAGGTCACTGAATTCCAAGGTCTTGGAAAGGGCACCATGCTCAATTGGAATTCTAGTCAATCGTGGCCCTAAAGGCCATAATTCACATTGTTACAAAGTAGCCATGATTTTCCTTGGTGGGCCAGATGATAGAGAAGCTTTGTGCTTGGCTAAAAGGTTTGCAAAAAATTTAGATAATAGATTGTTTGTGTACCGATTGCTTGCACATGACCATGATTCCACGAATTGGGAACACATGATCGATGATGAGGAGCTAAGGGAGGTTCGCGGAGCTTATATGAAACTTGAAAATGTGACATATGAGGAAAAAACTATAGATGATGCATCCCAGACAACAAATTTCCTCAAAGATATAGCAAATAAATTTGATTTTATTGTAGTTGGGAGACGCAATGGGGTCAAATCTTCTCAGACAATGGGATTGGAAAATTGGACTGAGTTTTCAGAATTGGGGGTGATTGGTGATTTGCTTGCTTCACCAGATATGGAGAATACAGCCTCAGTTCTAGTTGTGCAACAACAACAAACGACGTCTATATCGTCGTAA 2061 0.4265 MLFPFGSPDILNTITSLGYAIFLFLNSVQMDFTLITKTGKKAWVIALLSHFTPIIIGNTIVISHFAFWGKHLGVDETFALPVVVISHSGCSFAVVASLLNDLEILNSELGRLALSSAFLNDLAGGIVAGVGTAIISSMKSGMSIMITNLVLFLGYLVLIPLIGRPAMRWIVRNTPEGRPVNKLYIYAIIITMFLLGHLAGRFNQPFLAGAVILGLAVPEGPPLGSELVNQLDLFSSWFLVPIFVTCCTMKVDLTQCGPPVLVLVITCFIIMVHLVRLLQCVGICRYCNMPTSDGFCLALILSCKGVVDICSFVLVYDGLKQSPPAIGIMVISVLIMGTISRIGVKALYDPSRKYAGYQKRNIMNLKHNSELRVVACVHKPSHVIHIKNFLQLCSPAQDNTLVVDVLHLMELIGRTSPIFIAHRLQQKAVGSTHNYSGELIVTFDLFEREYAGSATANTYTAISPATFLHEDVCYLALDKNASIIILPFHIRWTENGAIESEDNKIRSLNSKVLERAPCSIGILVNRGPKGHNSHCYKVAMIFLGGPDDREALCLAKRFAKNLDNRLFVYRLLAHDHDSTNWEHMIDDEELREVRGAYMKLENVTYEEKTIDDASQTTNFLKDIANKFDFIVVGRRNGVKSSQTMGLENWTEFSELGVIGDLLASPDMENTASVLVVQQQQTTSISS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03136 686 Gene3D - 2 355 IPR038770 -
Rops11g03136 686 PANTHER CATION/H + ANTIPORTER 2 681 - -
Rops11g03136 686 Pfam Sodium/hydrogen exchanger family 7 338 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03136 Rops-Chr11 58049768 58052509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03136 5 680 Antiporter Super Family AT5G22900 35.833 2.03e-143 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03136 K26731 - gmx:100797272 984.941