Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03131 ATGGGGCCAAAATTGGATTTGGTGTTAGGAGGCATTGGTCCAACAAATGTAAAAAGAACCGGAAAGATAACTTCATATAGATTTGTATGTTGCAAAGAAGGCTGTCGTAGACTAGATAAGAGGGATTATTTATCTATTAATCCTCAACCTGAGACTAGAACCAATTGTCCAACTAGAATGGCAATCAAGTATGAAAACGAAAGTGGTAAATATTTGGTTCATGACTTTGTTGAGCAACATAATCATGTTTTTCATCTCGCAGAAACCACTCAAATGTTAGCATGTCAGTGTAAATTATCTGAAGTCCAAGCTTATGAAATTGACTTGGCAAATGCTACCGGGATTAAGCAAAAAGCATCATTTGAATTAATGAGTGCTCGTGTTGGTGGAAGATCTAATCTTGGCTACACCAATTAG 417 0.3669 MGPKLDLVLGGIGPTNVKRTGKITSYRFVCCKEGCRRLDKRDYLSINPQPETRTNCPTRMAIKYENESGKYLVHDFVEQHNHVFHLAETTQMLACQCKLSEVQAYEIDLANATGIKQKASFELMSARVGGRSNLGYTN* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03131 138 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 132 - -
Rops11g03131 138 Pfam FAR1 DNA-binding domain 17 83 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03131 Rops-Chr11 57970015 57970431 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops11g03131 FAR1 8.9e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03131 - - psat:127096362 150.214