Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03102 ATGGGCTCACTTCCTAAGAGACCATATTCCCCCACCTTTCACCATCTCAGAATACTACAACAAGTCTTTGGTGGCAGCAAATCAACAAGTTCCTTAATTCATAGTTACAAGAGAAGTTTCAATGGCTTTGCTGCCATGCTCACTGATCAGCAAAAGCAAAAGGTTACTCAGATGAAAGGTGTAATCTCAGTTTTCCCAAGTGGAACTCTTCAACTCCATACAACAAGATCTTGGGACTTCATGGGATTTCCTCAATCAGTCAAAAGAAACCAAATTGCTGAGAGTGATGCTGTGATTGGAGTTTTTGACACTGGTATCTGGCCAGAATCAGAGAGTTTCAGTGATCATGGTTTTGGTTCCATTCCCCAAAAGTGGAAGGGTACTTGTGCAGGTGGCAAGAACTTTACATGCAACAAGAAGGTCATTGGAGCCAGGTTTTATGTAGATGAATCTGCAAGAGACAGTGATGGACATGGAACCCATACAGCATCAATAGCAGCAGGAAATGAAGTTAACAATGTTAGTTTTTATGGACTTGCACAAGGCACTGCAAGAGGAGGGGTTCCATCAGCAAGAGTTGCAGTATACAAAGTTTGCAATACCTCAGGTTGCAATGAGGCTAGTGTCTTGGCTGCTTTTGATGATGCAATAGCTGATGGAGTTGACATCATTTCAATTTCAATGGGAAAAAATGATCCATTTCCCTTTGAAGAAGATGTCATTGCAATTGGTTCATTTCATGCTATGGCAGCAAGAGGGATTCTTACAGTGAATTCTGCTGGAAACAATGGCCCTGATCCAAGCACAGTTTCAAGTTTAGCACCATGGATACTAACTGTAGCATCAAACACCATAGATCGTCAAATCATTGACAAGGTAGTTCTTGGGAATGGAAAAACACTATATGGAAATTCAGTAAATTCATTCACATCAAATGAAACCAAATTCCCCATTGCATTGAAAAATGGTGATTCAAAAGAGTGTCCAAAAGATAGAGCTGAAGACTGTGACTGTTTAGATAGTACTTTGGTGAAAGGGAAGATAGTTTTATGTCCTTATCCTGATGGGCAAGATGCAGCTAAAAATTATGGTGCAATTGGTGCAATCACAGAGGATGATGGAGAAGGCAATGCATCATATGTTACTCCATTACCTTCCCTTACATTGTTTTCCAATGACTATGCTCTTGTTATATCTTACACAAATTCAACAAAAGACCCACAAGCTGAAATTCTCAAAAGTGAGATTATTAAAGATCTTACTGCTCCTAGAGTGGCAGAGTCATCTTCAAGAGGACCAAATAGCATAGTTTCTGAAATTCTGAAACCAGATATAAGTGCCCCAGGGGTTGATATCTTAGCAGCTTATTCACCAATTGCTTCACCCTCAGATAATCCTCAAGACAAAAGATCAGTCAAATACAACATACTAACAGGAACTTCCATGGCATGCCCCCATGTTTCTGCAATAGCTTTATATTTGAAAACTTTTCACCCTGATTGGTCACCAGCAGCCATCAAATCTGCTATTATGACTTCAGCGCAACCCATGAATGGTTCTTCTAAGGATCAAATTGGTGAATATGCTTAG 1590 0.4 MGSLPKRPYSPTFHHLRILQQVFGGSKSTSSLIHSYKRSFNGFAAMLTDQQKQKVTQMKGVISVFPSGTLQLHTTRSWDFMGFPQSVKRNQIAESDAVIGVFDTGIWPESESFSDHGFGSIPQKWKGTCAGGKNFTCNKKVIGARFYVDESARDSDGHGTHTASIAAGNEVNNVSFYGLAQGTARGGVPSARVAVYKVCNTSGCNEASVLAAFDDAIADGVDIISISMGKNDPFPFEEDVIAIGSFHAMAARGILTVNSAGNNGPDPSTVSSLAPWILTVASNTIDRQIIDKVVLGNGKTLYGNSVNSFTSNETKFPIALKNGDSKECPKDRAEDCDCLDSTLVKGKIVLCPYPDGQDAAKNYGAIGAITEDDGEGNASYVTPLPSLTLFSNDYALVISYTNSTKDPQAEILKSEIIKDLTAPRVAESSSRGPNSIVSEILKPDISAPGVDILAAYSPIASPSDNPQDKRSVKYNILTGTSMACPHVSAIALYLKTFHPDWSPAAIKSAIMTSAQPMNGSSKDQIGEYA* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03102 529 CDD PA_subtilisin_like 293 411 - -
Rops11g03102 529 ProSitePatterns Serine proteases, subtilase family, serine active site. 479 489 IPR023828 -
Rops11g03102 529 Gene3D Peptidase S8/S53 domain 96 522 IPR036852 GO:0004252|GO:0006508
Rops11g03102 529 Pfam Subtilase family 95 515 IPR000209 GO:0006508|GO:0008236
Rops11g03102 529 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Rops11g03102 529 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Rops11g03102 529 PRINTS Subtilisin serine protease family (S8) signature 478 494 IPR015500 -
Rops11g03102 529 PRINTS Subtilisin serine protease family (S8) signature 154 167 IPR015500 -
Rops11g03102 529 Gene3D - 286 418 - -
Rops11g03102 529 ProSiteProfiles Serine proteases, subtilase domain profile. 77 529 - -
Rops11g03102 529 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 520 IPR045051 -
Rops11g03102 529 SUPERFAMILY Subtilisin-like 79 523 IPR036852 GO:0004252|GO:0006508
Rops11g03102 529 CDD Peptidases_S8_3 70 514 IPR034197 -
Rops11g03102 529 Pfam Peptidase inhibitor I9 15 73 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03102 Rops-Chr11 55724631 55726220 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03102 1 518 Subtilisin-like Serine Gene Family AT5G59190 57.252 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03102 - - lang:109341651 648.277