Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops11g03099 | ATGGCCATGCATGGTTCTAGAGTCACTTATGTTTCTTATGCCTCTTTCATTCTTGCATGTATATTTTCCCTGTCCTGTGAGGCTGTTGCTGATAATCCAAAGCTTCATATTGTGTATATGGGCTCCCTTCCAAATAAGCCTTATTCTCCAACCACTCACCATCTCAACATGCTGCAACAAGTATTTGAGGGCAGAAATTCAACAAATTCCCTCATTCATAGTTATAAGAGAAGCTTTAATGGGTTTGCCGCCGTGCTCACTGATCAACAAAGGGATATGCTAACTCAGATGGAAGGTGTTATCTCAGTTTTCCCAAGCAAAACTCTTCAAACACAAACAACAAGATCTTGGGACTTCATGGGGTTTCCTCAATCAATCAAACACAGCCATACTGGTGAGAGTGATGTTGTGATTGGAGTATTTGACACTGGAATCTGGCCAGAATCAGAGAGTTTCAGTGATCATGGTTTTGGTCCCATTCCCAAAAAGTGGAAAGGTACTTGTGCAGGTGGCAAGAACTTCACTTGCAACAAAAAGATTATTGGAGCAAGGTTTTATGTAGATGTGTCTGCCAGAGACTCTGTTGGCCATGGAAGCCATACAGCATCAACAGCAGCAGGAAACCAAGTTAACAATGTGAGCTTATATGGACTTGCACAAGGCACTGCAAGAGGAGGGGTTCCATCATCAAGAGTTTCTATGTATAAAGTATGTGATGAGCAGCAATGCACGGAAGCTAGTGTCTTGGCTGCTTTTGATGATGCCATAGCAGATGGAGTTGACATCATTTCCATTTCATTAGGAACTGCCTTTGCATTGGAGTTTGATAATGATGTTATTGCAATTGGTTCTTTTCATGCTATGGGAAAAGGGATTCTTACGGTGCATTCTGCAGGCAATACTGGTCCTGATCTAAGCTCAGTCGCAAGCGTAGCTCCATGGATTCTATCTGTTGCAGCAAGTACCATGGATCGTCAATTCATTGACAAGATTGTTCTTGGGAATGGAAAAACACTAATAGGGAAATCAATAAATACTTTCACATCAAATGGAACAAAATTTCCCCTCGCTAAGATGTTTGGTGGTAAGCATGGTGATTTAGATGAGTCCGTGAAAGGAAAGATAGCTTTATGTGGCTATGCTGATTACGAAGACTTTGCTTATAGTGATGGGGCAATTGGTGTAATCAAAGGGAAATACACTGAAGGTTTTACACCACAAGTTACTATAATACCTACTGTGGCATTGTATTCCCAAGACTATGATTTTGTGGAATCCTATAAAAGTTCAACAAAAGATCCAAAAGGTGAAATACTCAAGAGTGAGATAATTGGAGATCATACAGCCCCTACTATTGCTAAGTTTTCTTCACGTGGACCAAATACGAAAGTTTCAGAAATTTTGAAACCAGATATCAGTGCCCCTGGGGTAGAAATCTTGGCTGCATATTCACCCACCGCATCACCCTCACAGAATCCTCAAGATAAAAGATCTGTCAAATACAACATACTATCTGGAACATCAATGTCATGTCCCCATGTTGCTGGAATAGCTGCATATGTGAAATCTTTTCACTTGGATTGGTCACCTGCAGCTATCAAATCTGCGATTATGACCTCAGCACAACGCATGAACAGTTCTAAGGATCAAATTGGTGAATATGCTTATGGATCAGGGCATGTCAATCCTGTGCAAGCTATTAATCCTGGCCTTATTTATGACATTGGTAAGGAGGATTATATACAAATGTTCTGCAATTTGGGTTACAATAATGAAAGGATCAAAAATATATCTGGTGAAAATATCCATTGCTCTGGAGCACCTGATAGATCCTTAGTAAAAAATCTTAATTATCCTGCACTTGCAGCTCAAGTGGAGCCTGAGGAATCTTTCAGTGTAAGGTTTAATAGAACAGTCACAAATGTTGGTTTAGCAAACTCAAATTACAGGGCAACTATTTTACCAAATTCAAAAATCAATATTACGGTGGCACCAGAGATTTTGTCCTTCAAATCATTGAACGAGAAGTTGTCTTTTATGGTCACTATCACTGGTGGGAAATTACAAAGTGAAACTGTGCTCAGTTCATCACTGATATGGTCAGATGGCACCCATAATGTGCGAAGTCCAATTGTTGTGAATGTTTCTAATTAG | 2154 | 0.3997 | MAMHGSRVTYVSYASFILACIFSLSCEAVADNPKLHIVYMGSLPNKPYSPTTHHLNMLQQVFEGRNSTNSLIHSYKRSFNGFAAVLTDQQRDMLTQMEGVISVFPSKTLQTQTTRSWDFMGFPQSIKHSHTGESDVVIGVFDTGIWPESESFSDHGFGPIPKKWKGTCAGGKNFTCNKKIIGARFYVDVSARDSVGHGSHTASTAAGNQVNNVSLYGLAQGTARGGVPSSRVSMYKVCDEQQCTEASVLAAFDDAIADGVDIISISLGTAFALEFDNDVIAIGSFHAMGKGILTVHSAGNTGPDLSSVASVAPWILSVAASTMDRQFIDKIVLGNGKTLIGKSINTFTSNGTKFPLAKMFGGKHGDLDESVKGKIALCGYADYEDFAYSDGAIGVIKGKYTEGFTPQVTIIPTVALYSQDYDFVESYKSSTKDPKGEILKSEIIGDHTAPTIAKFSSRGPNTKVSEILKPDISAPGVEILAAYSPTASPSQNPQDKRSVKYNILSGTSMSCPHVAGIAAYVKSFHLDWSPAAIKSAIMTSAQRMNSSKDQIGEYAYGSGHVNPVQAINPGLIYDIGKEDYIQMFCNLGYNNERIKNISGENIHCSGAPDRSLVKNLNYPALAAQVEPEESFSVRFNRTVTNVGLANSNYRATILPNSKINITVAPEILSFKSLNEKLSFMVTITGGKLQSETVLSSSLIWSDGTHNVRSPIVVNVSN* | 718 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops11g03099 | 717 | CDD | Peptidases_S8_3 | 109 | 541 | IPR034197 | - | |
| Rops11g03099 | 717 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 506 | 516 | IPR023828 | - | |
| Rops11g03099 | 717 | CDD | PA_subtilisin_like | 331 | 438 | - | - | |
| Rops11g03099 | 717 | FunFam | Subtilisin-like protease SBT1.5 | 584 | 716 | - | - | |
| Rops11g03099 | 717 | FunFam | Subtilisin-like protease SBT5.3 | 25 | 112 | - | - | |
| Rops11g03099 | 717 | Gene3D | - | 584 | 716 | - | - | |
| Rops11g03099 | 717 | SUPERFAMILY | Subtilisin-like | 114 | 568 | IPR036852 | GO:0004252|GO:0006508 | |
| Rops11g03099 | 717 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | - | - | |
| Rops11g03099 | 717 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
| Rops11g03099 | 717 | PRINTS | Subtilisin serine protease family (S8) signature | 193 | 206 | IPR015500 | - | |
| Rops11g03099 | 717 | PRINTS | Subtilisin serine protease family (S8) signature | 505 | 521 | IPR015500 | - | |
| Rops11g03099 | 717 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 37 | 713 | IPR045051 | - | |
| Rops11g03099 | 717 | Pfam | Subtilase family | 134 | 559 | IPR000209 | GO:0006508|GO:0008236 | |
| Rops11g03099 | 717 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 21 | 111 | IPR037045 | - | |
| Rops11g03099 | 717 | Pfam | Peptidase inhibitor I9 | 36 | 111 | IPR010259 | - | |
| Rops11g03099 | 717 | Pfam | Fibronectin type-III domain | 615 | 713 | IPR041469 | - | |
| Rops11g03099 | 717 | Gene3D | Peptidase S8/S53 domain | 135 | 580 | IPR036852 | GO:0004252|GO:0006508 | |
| Rops11g03099 | 717 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 116 | 567 | - | - | |
| Rops11g03099 | 717 | Gene3D | - | 324 | 445 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops11g03099 | Rops-Chr11 | 55661544 | 55663697 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Rops11g03099 | 11 | 715 | Subtilisin-like Serine Gene Family | AT5G58830 | 53.186 | 0.0 | 754 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops11g03099 | - | - | psat:127076787 | 828.55 |