Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03098 ATGGCTAAGCATAGTACTATGGTCACTTATGTTTCTTATGTCTCTTTCATTCTTGCATGGATAATTTCCTTATCATGTGAGGTTGTTGCTGAAAATCCAAAGCTTCATATTGTGTACATGGGCTCCCTTCCAAAGAGACCATATTCTCCAACCTCTCATCATCTCAGCATGCTGCAACAAGTCTTTGATGGTAGCAATTCAACAAATTCCCTCATTCATAGTTACAAGAGAAGCTTCAATGGCTTTGCTGCTATGCTAAGTGATCAACAAAGGGACAAGCTAACTCAGATTGAAGGTGTTATCTCAGTTTTCCCAAGCAAAACTCTTCAACTGCATACAACAAAATCTTGGGACTTCATGGGGTTTCCAGAGTCTGTTAAACGAAGCCAAACTGTTGAAAGTGATACTGTGATTGGATTTTTTGACACTGGAATCTGGCCAGAATCAGAGAGTTTCAGTGATCATGGTTTTGGTCCCATTCCCAAAAAGTGGAAGGGTACTTGTGTAGGTGGAAAGAACTTTACTTGTAACAAGAAGATTATTGGAGCAAGGTTTTATGGTGATGATTCTGCTAGAGACTTTAATGGCCATGGAACCCATACAGCATCAATAGCAACAGGAAACCAAGTTGACAATGTGAGCTTTTATGGATTTGCACAAGGCACTGCAAGAGGAGGGATTCCATCCGCAAGAATTGCTGTGTATAAGGTATGTGCTAAACAATGCACAGACGCTAGCATATTAGCTGCTTTTGATGATGCCATAGCAGATGGAGTTGACGTCATTTCCATTTCATTGGGATCCATAATAGCATTCAACTTTGATAAAGATGCTATTGCAATTGGTTCATTTCATGCTATGGGAAAAGGGATTCTCACAGTGCATTCTGCAGGCAATGGTGGCCCTGATCCAAGCACAGTTGCAAGTGTAGCACCATGGTTGTTATCTGTTGCAGCAAGTACCATAGATCGTCAATTCATTGACAAACTAGTTCTTGGGAATGGAAAAACGCTAATCGGGGAATCCATAAATCCTTTCACATCAAATGGTACAAAATTTCCCCTCGCTATGCTGTTTGGTGATTCAGGAGAGTCTGTGAAAGGAAAGATAGCTTTGGGTGATTATGCTGATAAGGAAAATGTAGCTTATATGAAAGGGGCGGTTGGTCTAATCAAAGGGAAATCCACTGAGGGTTTTATACCCGGAGTTACTATAATACCTTCTGTTGCATTGGATTCCAATGACTATACTCTTGTGGAAGCCTACAAAAATTCAACAAAAGATCCAAAAGGCGAAATACTCAAGAGTGAGATTATTGGAGATCATACAGCCCCGACTGTTGCTGAGTTTTCTTCACGCGGACCAAATTTGAAAGTTCCAGAAATTCTGAAACCAGATATCAGTGCCCCTGGAGTAGAAATCTTGGCTGCATATTCACCCATTGCTTCACCCTCACAGAATCCTGAAGACAAAAGATCTGTTAAATACAACATACTATCTGGAACATCAATGTCATGTCCCCATGTTGCTGGAATAGCTGGTTATGTGAAAACTTTTCACTTGGATTGGTCACCAGCAGCCATCAAATCTGCTATTATGACTTCAGCACAACCCATGAATGGTTCTTCTAAGGATCAAATCGGTGAATATGGTTATGGATCAGGGCATGTCAATCCTGTGCAAGCTATTAATCCTGGGCTTATTTATGACATCGGTAAGGAGGATTATCTACAAATGCTCTGCAATTTGGGTTACGATAATGAAAAGATCAAAATAATATCTGGTGAAAATATCCATTGCTCTGAAACACCCGATAGATCCTTAGTAAGAAATGTTAATTATCCTACATTTGCAACTCAAGTTCAGCCCGAGGCATCTTTTAGTGTAAGGTTCAACAGAACAGTCACAAATGTTGGGTTTGCAAACTCAAATTACAAGGCAACTATTTCACCAAATTCAAAAATCAACATTACGGTGGCACCTGAGATTTTGTCCTTCAAATCATTGAACGAGAAGCTATCTTTTGTTGTCACTATCACTGGTGGGAAGTTACAAAGTGAAACTGTGCTCATTTCATCACTCATATGGTCAGATGGCACCCATAATGTGCGAAGTCCAATTGTAGTGAATGTTTCTAGTTAG 2142 0.4006 MAKHSTMVTYVSYVSFILAWIISLSCEVVAENPKLHIVYMGSLPKRPYSPTSHHLSMLQQVFDGSNSTNSLIHSYKRSFNGFAAMLSDQQRDKLTQIEGVISVFPSKTLQLHTTKSWDFMGFPESVKRSQTVESDTVIGFFDTGIWPESESFSDHGFGPIPKKWKGTCVGGKNFTCNKKIIGARFYGDDSARDFNGHGTHTASIATGNQVDNVSFYGFAQGTARGGIPSARIAVYKVCAKQCTDASILAAFDDAIADGVDVISISLGSIIAFNFDKDAIAIGSFHAMGKGILTVHSAGNGGPDPSTVASVAPWLLSVAASTIDRQFIDKLVLGNGKTLIGESINPFTSNGTKFPLAMLFGDSGESVKGKIALGDYADKENVAYMKGAVGLIKGKSTEGFIPGVTIIPSVALDSNDYTLVEAYKNSTKDPKGEILKSEIIGDHTAPTVAEFSSRGPNLKVPEILKPDISAPGVEILAAYSPIASPSQNPEDKRSVKYNILSGTSMSCPHVAGIAGYVKTFHLDWSPAAIKSAIMTSAQPMNGSSKDQIGEYGYGSGHVNPVQAINPGLIYDIGKEDYLQMLCNLGYDNEKIKIISGENIHCSETPDRSLVRNVNYPTFATQVQPEASFSVRFNRTVTNVGFANSNYKATISPNSKINITVAPEILSFKSLNEKLSFVVTITGGKLQSETVLISSLIWSDGTHNVRSPIVVNVSS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03098 713 ProSitePatterns Serine proteases, subtilase family, serine active site. 501 511 IPR023828 -
Rops11g03098 713 FunFam Subtilisin-like protease SBT1.5 580 712 - -
Rops11g03098 713 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 112 IPR037045 -
Rops11g03098 713 ProSiteProfiles Serine proteases, subtilase domain profile. 116 563 - -
Rops11g03098 713 Pfam Fibronectin type-III domain 611 709 IPR041469 -
Rops11g03098 713 Gene3D - 323 440 - -
Rops11g03098 713 FunFam Subtilisin-like protease SBT5.3 25 112 - -
Rops11g03098 713 SUPERFAMILY Subtilisin-like 116 564 IPR036852 GO:0004252|GO:0006508
Rops11g03098 713 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Rops11g03098 713 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Rops11g03098 713 PRINTS Subtilisin serine protease family (S8) signature 500 516 IPR015500 -
Rops11g03098 713 Gene3D - 580 712 - -
Rops11g03098 713 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Rops11g03098 713 Pfam Peptidase inhibitor I9 36 112 IPR010259 -
Rops11g03098 713 Pfam Subtilase family 134 542 IPR000209 GO:0006508|GO:0008236
Rops11g03098 713 CDD PA_subtilisin_like 330 433 - -
Rops11g03098 713 Gene3D Peptidase S8/S53 domain 135 576 IPR036852 GO:0004252|GO:0006508
Rops11g03098 713 CDD Peptidases_S8_3 109 536 IPR034197 -
Rops11g03098 713 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 709 IPR045051 -
Rops11g03098 713 FunFam Subtilisin-like protease SBT1.5 135 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03098 Rops-Chr11 55621311 55623452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03098 31 711 Subtilisin-like Serine Gene Family AT5G58830 53.690 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03098 - - psat:127076787 834.713