Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03091 ATGGCCACTCCTCCATCTCCTTTCAGTTTTGTACATTTTTGCTTCCTCTTCTTCCTTGTGTGCTTCATTAGTCCTGCTTCTGTTTCTTCACTTCCTCTTTCTTTGAGAAGGCAAGCTTCTATCTTGGTTTCTATGAAACATGATTTTGAAGCTGCTAACTCTTCTTTGAGCAGCTGGGACATGTCTAACTACTTGTCACTTTGCACCTGGTATGGCATTCAGTGTGACCATAGTAACAGGTCTGTGGTGTCACTTGACATATCCAATTTAAATGTTTCTGGGTCACTTTCACCTGCCATCACAGGACTCTTGAGCCTAGTCAATGTGTCAATCCAGGGAAATGGCTGTTATGGGGAGTTCCCAGCTGATATTCACAAGCTAGAAAGGTTGAGATTCCTAAACATATCCAACAATTTGTTCAGTGGAAACTTGAGTTGGGAATTCTCCGAGATGAAGGAGCTTGAAGTGCTAGATGCTTATGACAATGATTTCAATGGTTCACTTCCTGAGGGTGTCACTCAGCTCATAAGGCTGAAGCACTTGAATTTTGGCGGGAATTACTTCTCTGGGAAAATCCCTCCAAGCTATGGAAACATGGGGCAGCTCAACTTTCTTTCTCTTGCAGGGAATGATTTGAGAGGTTTCATACCCAGAGAGTTTGGAAATCTCACTAATCTGACCCATCTTTACTTGGGATACTACAATCAATTTGATGGTGGAATCCCACCTGAACTTGGTAAGCTGAAGAATTTGGTTCATTTAGACCTTGCAAGCTGTGGCTTGGAAGGTTCAATTCCAGCTGAGTTGGGGAACCTCAACAAGTTGGACACTCTCTTCTTGCAAACTAATCAGCTCACTGGTTCAATCCCACCCCAGCTAGGAAACGTGAGTAGCTTGAAAGCTCTTGATCTATCATTCAATAAACTAACAGGAGACATCCCAAATGAGTTCTCAGGTCTTCAAGAGCTTAACCTCTTGAACTTATTCATCAACAGGTTTCATGGAGAAATTCCTCATTTCATTGCTGAGCTACCTAAATTGGAGGTACTGAAGCTTTGGCAGAACAACTTCACTGGAGAAATTCCCTCAAAGCTTGGCCAGAATGGCAGATTGACTGAGCTTGATTTGTCAACAAATAAGCTCACTGGATTAGTGCCAAAATCTCTATGCTTTGGGAAGAGGCTGAAGATTTTGATCTTGCTAAAGAATTTTCTGTTTGGATCTTTGCCTGATGATCTTGGTCAATGCTACACACTCCAAAGAGTTCGTTTGGGTCAAAACTATTTCACTGGTCCACTGCCACATGGACTTCTTTATTTGCCTGAGCTATCTCTCTTGGAACTACAGAACAATTATCTTAGTGGTGGGCTTCCACAAGAAACAAGCAATGCACCCTCCAAACTTGGACAGTTGAATCTATCAAACAATCGTTTATCAGGGTCTCTTCCAACCTCAATTGGAAATTTTCCCAACTTACAAATTCTGCTGCTTAGTGGAAATAGATTCTCAGGAGAAATCCCACCAGATATAGGGAGATTGAAAAATATCCTTAAGTTTGATATAAGTGTTAACAACTTTTCAGGTACTATTCCTCCCGAGATTGGTAATTGTGCCTTACTCACCTATTTAGATTTGAGCCAAAACCAGCTATCAGGCCCTATCCCAGTTCAAATTGCTCAAATTCATATATTGAACTATCTTAATGTCTCATGGAACCAACTAAACCAAAGCCTTCCCAAGGAACTTGGGGCCATGAAGGGATTAACTTCAGCAGATTTCTCTCACAATAACTTCTCTGGTTCAATTCCTGAGGGAGGACAATTCTCAATCTTTAATTCTACATCCTTTGTGGGTAATTCTCAGCTCTGTGGATATGACTTAAATCAATGCAACCTTTCTTCAACAACTGTATTGGAATCTCAAGAGAAAAGCAGTGCAAAACCTGGAGTCCCTGGGAAGTTTAAGTTCCTTTTTGCATTGGCATTGTTGGGATGCTCATTGGTGTTTGCAACCTTAGCCATCATCAAGAGTAGAAAGGCAAGGAGGCACTCCAATTCATGGAAGCTCACAGCATTTCAGAAGCTGGAATATGGAAGTGAAGACATCATAGGGTGCATAAAAGAAAGCAATGTCATAGGAAGTGGTGGAGCTGGGGTTGTGTACAGAGGAACCATGCCAAATGGAGAGGAAGTGGCTGTGAAGAAGCTTTTGGGAATCAACAAAGGCTCTTCTCATGATAATGGCTTCTCTGCAGAAATAAAGACATTGGGTAGAATCAGACACAGGTACATTGTAAGGTTGCTAGCGTTTTGTTCAAATAGAGAGACCAATTTACTTGTTTATGATTACATGCCAAATGGAAGCTTAGGTGAAGTCTTGCATGGGAAGAGGGGTGAGTTTCTCAAGTGGGATACTAGGTTGAAAATAGCCACAGAAGCTGCAAAAGGACTTTGTTATCTGCACCATGATTGTTCCCCTTTGATAATCCATAGAGATGTCAAGTCAAACAACATATTATTGAACTCTGATTTTGAGGCTCATGTTGCTGATTTTGGGCTTGCCAAATTCATGCAAGATAATGGGACATCAGAATGCATGTCTTCCATTGCTGGTTCTTATGGCTATATAGCTCCAGAATATGCATACACATTGAAAGTTGATGAGAAAAGTGATGTATATAGCTTTGGAGTGGTGCTGCTAGAACTTTTAACTGGGAGAAGACCAGTTGGGGATTTTGGAGAAGAAGGATTAGACATTGTTCAATGGACCAAGATGCAAACCAATTGGAACAAAGAGATGGTGATGAAGATCCTTGATGAGAGGCTACGTCACATTCCTTTAGAAGAAGCAAAGCAGGTTTTTTTTGTGGCCATGTTATGTGTTCATGAACACAGTGTGGAGAGACCAACTATGAGGGATGTGGTTGAAATGCTTGCACAAGCAAAACAACCAAACACATTTCAGATGAAGTGA 2973 0.4127 MATPPSPFSFVHFCFLFFLVCFISPASVSSLPLSLRRQASILVSMKHDFEAANSSLSSWDMSNYLSLCTWYGIQCDHSNRSVVSLDISNLNVSGSLSPAITGLLSLVNVSIQGNGCYGEFPADIHKLERLRFLNISNNLFSGNLSWEFSEMKELEVLDAYDNDFNGSLPEGVTQLIRLKHLNFGGNYFSGKIPPSYGNMGQLNFLSLAGNDLRGFIPREFGNLTNLTHLYLGYYNQFDGGIPPELGKLKNLVHLDLASCGLEGSIPAELGNLNKLDTLFLQTNQLTGSIPPQLGNVSSLKALDLSFNKLTGDIPNEFSGLQELNLLNLFINRFHGEIPHFIAELPKLEVLKLWQNNFTGEIPSKLGQNGRLTELDLSTNKLTGLVPKSLCFGKRLKILILLKNFLFGSLPDDLGQCYTLQRVRLGQNYFTGPLPHGLLYLPELSLLELQNNYLSGGLPQETSNAPSKLGQLNLSNNRLSGSLPTSIGNFPNLQILLLSGNRFSGEIPPDIGRLKNILKFDISVNNFSGTIPPEIGNCALLTYLDLSQNQLSGPIPVQIAQIHILNYLNVSWNQLNQSLPKELGAMKGLTSADFSHNNFSGSIPEGGQFSIFNSTSFVGNSQLCGYDLNQCNLSSTTVLESQEKSSAKPGVPGKFKFLFALALLGCSLVFATLAIIKSRKARRHSNSWKLTAFQKLEYGSEDIIGCIKESNVIGSGGAGVVYRGTMPNGEEVAVKKLLGINKGSSHDNGFSAEIKTLGRIRHRYIVRLLAFCSNRETNLLVYDYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFMQDNGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGLDIVQWTKMQTNWNKEMVMKILDERLRHIPLEEAKQVFFVAMLCVHEHSVERPTMRDVVEMLAQAKQPNTFQMK* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03091 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 348 634 - -
Rops11g03091 990 Gene3D Ribonuclease Inhibitor 507 631 IPR032675 -
Rops11g03091 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 148 235 - -
Rops11g03091 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 236 341 - -
Rops11g03091 990 Pfam Leucine rich repeat 441 502 IPR001611 GO:0005515
Rops11g03091 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Rops11g03091 990 ProSiteProfiles Protein kinase domain profile. 706 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03091 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 37 147 - -
Rops11g03091 990 SUPERFAMILY Protein kinase-like (PK-like) 700 978 IPR011009 -
Rops11g03091 990 SUPERFAMILY L domain-like 370 628 - -
Rops11g03091 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 675 783 - -
Rops11g03091 990 Gene3D Ribonuclease Inhibitor 238 392 IPR032675 -
Rops11g03091 990 Gene3D Phosphorylase Kinase; domain 1 676 783 - -
Rops11g03091 990 SMART serkin_6 706 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03091 990 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Rops11g03091 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 784 990 - -
Rops11g03091 990 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 205 980 - -
Rops11g03091 990 Gene3D Ribonuclease Inhibitor 393 506 IPR032675 -
Rops11g03091 990 Pfam Protein tyrosine and serine/threonine kinase 708 978 IPR001245 GO:0004672|GO:0006468
Rops11g03091 990 Pfam Leucine Rich Repeat 298 320 IPR001611 GO:0005515
Rops11g03091 990 SUPERFAMILY RNI-like 84 430 - -
Rops11g03091 990 Gene3D Transferase(Phosphotransferase) domain 1 784 990 - -
Rops11g03091 990 Gene3D Ribonuclease Inhibitor 37 146 IPR032675 -
Rops11g03091 990 SMART LRR_typ_2 369 391 IPR003591 -
Rops11g03091 990 SMART LRR_typ_2 248 272 IPR003591 -
Rops11g03091 990 SMART LRR_typ_2 489 513 IPR003591 -
Rops11g03091 990 SMART LRR_typ_2 296 319 IPR003591 -
Rops11g03091 990 SMART LRR_typ_2 440 464 IPR003591 -
Rops11g03091 990 SMART LRR_typ_2 561 585 IPR003591 -
Rops11g03091 990 SMART LRR_typ_2 151 175 IPR003591 -
Rops11g03091 990 SMART LRR_typ_2 344 368 IPR003591 -
Rops11g03091 990 SMART LRR_typ_2 199 222 IPR003591 -
Rops11g03091 990 Gene3D Ribonuclease Inhibitor 147 237 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03091 Rops-Chr11 55473572 55478209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03091 23 980 Receptor kinase-like Gene Family AT5G65700 58.108 0.0 1107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops11g03091 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03091 - - gmx:100815103 1677.14