Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03089 ATGATGACACAGCCAACACTACCTTCTCCATCTTCCTTCACAAACTGTGATTGGCCTTACGACGTCTTCCTCAACTTTAGAGGTGAAACTCGCGAAAAGTTCACTAATGATCTCTACGATTCTCTTCAGAAAAAGTGTATCCGCACATTCATCGACGATAAAGAGCTTAGGAGAGGAGAAGTAATCAGGCCAGCTCTTCTCCAAGCCATTAAAGAATCCAGGATTTTCATTGCTGTTTTCTCCAACGACTATGCATCCTCAACATATTGTTTAGAAGAACTTGTCACGATCCTTGAATGCCTGAAGACACCAGGAAGGTTGTTTTTGCCAGTTTTCTATGACGTGGATCCATCACAAGTTCGGCACCAAAGAGGGACCTACGCAGAAGCTTTGGCAGCACATGAGGTGAGATTTCAGGATGACAAGGACAAGGTTCAAAAATGGAGGGATGCTTTAAGTCAAGCTGCAGAAGTGTCTGGCTGGCATTTTCAACCTGGGTCTGAATCAGAATATCAGTTTGTTACAAAGATCACTGACGAGGAGGACATTGTTCATGTTTTGAAAGAAAATACGGGATCTAATACAATTGAAGTCATAGCTCTGGAATCGTGGAGAAAAGTGATATGGAATGGAAAAGCTTTCAAGAAGATGAAAAACCTGAAAATTCTTATTATCGAAAATGCACTCTTTTCACAAGGCCCTCAAAATCTACCAAATAGTTTGAGAGTGTTAGACTGGATTCGTTATCCGTCACCTTCTCTACCATCTGATTTTAATCCCAAGAATCTGGTGATCTTCAACCTACCTGAAATTTGCCTTAAATCATTCAAATCACTCGAGGTGTTTGAGTCATTGAGATTTCTGAATTTTGGAGGCTGCGAGTTCTTAATTGAACTACCTAGTTTATCTGGGTTACCAAATTTGGGGTCATTGTATCTAGATGATTGCACTAATTTAATTAGGATCCATGACTCGGTTGGGTTTCTTGATAGACTCTTGTTATTGAGCGCTCGAAAATGCTTCCAACTACAAACTTTTGTACCCTCTATCAACATGACATCTCTAAAGTCTTTGAGTCTTAGGGATTGCTGTCATCTTAAAAGCTTCCCAGAAGTATTGGGAGTGATGGAGAATATAAGAGAGGTTTACTTAGACTGGACTGCAATAGAAAAATTGCCACTTTCAATTGGAAATCTTGTTGGGCTCGAACGATTGTTCCTGGGGAATTGCAGAAATTTGATCCAGCTACCAGGTAGCATCTACATGTTACCTAATCTTGAGATAATAATGGCTTATGAATATGATTGTAAGGGATTCCGAATATCTGAAGATAAAGAAAGAGTGATCTCAAAAGTGTTTCCAAAGGTCATGATTGTTTATGATTGGTGTGTGAAGTCCTTCCTTGATGTGTATTATCATAATATAAGCCCAAATAATCTCATAGAAGTATGCAGTCCTTCGTGGAATCCCAGCCATGACCGTTTTGTGGGTCATTTACAATGGAGAGAAGATTGGATAAAATTCCGGAGCAATCGACCATCTGTGGGTTTTTGTTTCCGAAAGAAATTCCCCACGATAGGTCTACTTTGTGTTGCAAATCCTGACATATCTTATACCAGGATATTGTTTGATTTCAAGTTCAGTGTACTCATCAATGGCACTAAGCAATTCAGTTCTTGGTGTAACTGCATAGATTATGCAAAGGAGCTAAAATTTTTCTGTGATCTACAATGCAAAGTGGAGGGGTTATTTTCAGAGCATGAATGGAATCAAGTGGAGATTTTATGTGAGATGGAATTTACCACGATAAGCGGTTATAAGACTAGGGGGATTATAAAGGAGGTGTGTCTTTATTTCTACATAGATAACAACGAGGGGGATTTCAAACTTGCAAATCGCAATCTAAGAGATTCAAATGGGTAG 1923 0.3931 MMTQPTLPSPSSFTNCDWPYDVFLNFRGETREKFTNDLYDSLQKKCIRTFIDDKELRRGEVIRPALLQAIKESRIFIAVFSNDYASSTYCLEELVTILECLKTPGRLFLPVFYDVDPSQVRHQRGTYAEALAAHEVRFQDDKDKVQKWRDALSQAAEVSGWHFQPGSESEYQFVTKITDEEDIVHVLKENTGSNTIEVIALESWRKVIWNGKAFKKMKNLKILIIENALFSQGPQNLPNSLRVLDWIRYPSPSLPSDFNPKNLVIFNLPEICLKSFKSLEVFESLRFLNFGGCEFLIELPSLSGLPNLGSLYLDDCTNLIRIHDSVGFLDRLLLLSARKCFQLQTFVPSINMTSLKSLSLRDCCHLKSFPEVLGVMENIREVYLDWTAIEKLPLSIGNLVGLERLFLGNCRNLIQLPGSIYMLPNLEIIMAYEYDCKGFRISEDKERVISKVFPKVMIVYDWCVKSFLDVYYHNISPNNLIEVCSPSWNPSHDRFVGHLQWREDWIKFRSNRPSVGFCFRKKFPTIGLLCVANPDISYTRILFDFKFSVLINGTKQFSSWCNCIDYAKELKFFCDLQCKVEGLFSEHEWNQVEILCEMEFTTISGYKTRGIIKEVCLYFYIDNNEGDFKLANRNLRDSNG* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03089 640 Gene3D Ribonuclease Inhibitor 187 462 IPR032675 -
Rops11g03089 640 ProSiteProfiles TIR domain profile. 18 156 IPR000157 GO:0007165
Rops11g03089 640 Pfam TIR domain 20 179 IPR000157 GO:0007165
Rops11g03089 640 Gene3D - 15 186 IPR035897 -
Rops11g03089 640 SMART till_3 19 158 IPR000157 GO:0007165
Rops11g03089 640 SUPERFAMILY L domain-like 207 438 - -
Rops11g03089 640 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 180 IPR044974 GO:0006952
Rops11g03089 640 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 161 IPR035897 -
Rops11g03089 640 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03089 Rops-Chr11 55404133 55408061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03089 183 429 WRKY Transcription Factor Family AT4G12020 35.472 1.62e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03089 - - mtr:11440666 462.611