Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03085 ATGACACAGTCAACACTGCCTTCTCCGTCTTCCTTCACTTGTGATTGGACTTATGATGTCTTCCTCAACTTTAGAGGTGTGGATACCCGCCACAATTTCACCACTGATCTCTACGATTCTCTGGAGCAAAAGGGTATCCGCACCTTCATCGACGATAAAGAGCTTAAGAGAGGAGAAGAAATCACGCCAGCACTTCTCCGAAACATTAAAGAATCCAGGATTTTCATTGCTGTTTTCTCCAAGAACTATGCATCCTCAACATATTGTTTGGATGAACTTGTCGCGATCCTTGAGTGCTTGAAGACACCAGGACGGTTGTTTTTGCCTGTTTTTTATGGAGTGGATCCATCACAAGTTCGGCACCAAATACGGACCTACGCAGAAGCTATGGCCAAACATGAGAAGAGGTTCAAGGATGATAAGGACAAGGTGCAAAAATGGAGGAATGCTTTACGCCAAGCTGCTGATGTGTCTGGCTGGCATTTCCAACTAGGGAAGCTGATGATGCTCAGACTACCTGAAATTTGCCTTAAATCATTCAAATCACTCAAGGTGTTTGAGTCGTTGATCTGTCTGGATTTTGTAAGCTGCGAGTTCTTGACTGAACTACCTAGTTTATCTGGGTTACCAAATTTGGAGTCATTGTATCTAGATGGTTGCTCTAATTTAATTAGGATCCATGACTCAGTTGGGTTTCTTGATAGACTCGTGTTACTGAGAGCTCAAGAATGCTGCCAACTACAGACTTTTGTACCCTCTATCAACTTGACATCGCTAAAGACCTTGGATCTTAGAGGTTGCTCACATCTTAAGAGCTTCCCAGAAGTATTGGGAGTGATGGAGAATATAAGAGAGGTTTATTTAGACAAGACTGCAATAGAAGAATTGCCACTTTCAATTGGAAATCTTGTTGGGCTGGAATGGTTGTTCTTGAGGAGATGCCTAAATCCGATTCAGCTACCAAGTAGCATCTACATGTTGCCTAATCTTGAGATAATAATGACTTATCATTGTGGGGGATTCCGATTATCTGAAGATAAAGAAATAGTGAGCTTAACAGCGTTTCCAAACAGCATGTGTGTTTATATTGAACATGGGTGGATCTTCCTTGACGTGTGTGCTCATAATATAAGCCCCAATAATGTCATAAAAGTATGTAGTCCTTCGTGGATACCCTCCCGTTACCATTTTGGGAGGCATTTACAAGGGAGAGTAGATTGGATAAAATTCCGGAGCAAGCAACCATCTGTAGGTTTTTGTTTCCGAAAGAAATTCCCCGCCATAGGTCTATTATGTGTTGCAAATCTTGGCATGGATGGTGAAAAGATGGCATTTGATTTCAAGTTCAGTGTGCTCATCAATGGGACTAAGCAATTCATTTCTTTATGTAACTACATATTTCATCCAAAAAGTTTGACGGAGGTACATTTTTTCTGTGATCTACAATGGAAAGTGGAGGGGGTATTTTCAGAGCATGAATGGAATCAAGTGGAGATTTTATGTGAGATGGAATATACCATGTTAAGCAGTTATAATAGGGTAACGGGGACCCGAGACGGGGCCACTATGGGGATTATAAAGGAGGTGTGTCTTTATTTCTACTTAGATAACAACGAGGGGGATTTCAAATTTGATCTCCCTCTGCCAAGAGGTCAGAAATGTCAAGAGATAGAGAGAACAAAGAGGGTCTTTCGCCCTACTGTATTGCTTCCAGCATTTGTAGATCATTTAAAATAA 1737 0.4128 MTQSTLPSPSSFTCDWTYDVFLNFRGVDTRHNFTTDLYDSLEQKGIRTFIDDKELKRGEEITPALLRNIKESRIFIAVFSKNYASSTYCLDELVAILECLKTPGRLFLPVFYGVDPSQVRHQIRTYAEAMAKHEKRFKDDKDKVQKWRNALRQAADVSGWHFQLGKLMMLRLPEICLKSFKSLKVFESLICLDFVSCEFLTELPSLSGLPNLESLYLDGCSNLIRIHDSVGFLDRLVLLRAQECCQLQTFVPSINLTSLKTLDLRGCSHLKSFPEVLGVMENIREVYLDKTAIEELPLSIGNLVGLEWLFLRRCLNPIQLPSSIYMLPNLEIIMTYHCGGFRLSEDKEIVSLTAFPNSMCVYIEHGWIFLDVCAHNISPNNVIKVCSPSWIPSRYHFGRHLQGRVDWIKFRSKQPSVGFCFRKKFPAIGLLCVANLGMDGEKMAFDFKFSVLINGTKQFISLCNYIFHPKSLTEVHFFCDLQWKVEGVFSEHEWNQVEILCEMEYTMLSSYNRVTGTRDGATMGIIKEVCLYFYLDNNEGDFKFDLPLPRGQKCQEIERTKRVFRPTVLLPAFVDHLK* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03085 578 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 162 335 IPR044974 GO:0006952
Rops11g03085 578 SMART till_3 17 157 IPR000157 GO:0007165
Rops11g03085 578 SUPERFAMILY L domain-like 163 358 - -
Rops11g03085 578 Gene3D Ribonuclease Inhibitor 168 271 IPR032675 -
Rops11g03085 578 Gene3D - 14 167 IPR035897 -
Rops11g03085 578 Gene3D Ribonuclease Inhibitor 272 365 IPR032675 -
Rops11g03085 578 ProSiteProfiles TIR domain profile. 16 155 IPR000157 GO:0007165
Rops11g03085 578 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 171 - -
Rops11g03085 578 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Rops11g03085 578 Pfam TIR domain 18 153 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03085 Rops-Chr11 55371452 55375081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03085 162 358 WRKY Transcription Factor Family AT4G12020 34.951 8.14e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03085 - - mtr:11415136 380.178