Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03079 ATGGCAAAACATGAGCAGAGGTTTCAGGATGACAAGGACAAAGTGCAAAAATGGAGGGATGCTTTACGTCAAGCTGCTAATGTGTCTGGCTTGCATTTCCAACACGGGTCTCAATCAGAATATAAGTTTATTAGAAAGATTGTTGAAGTGGTATCTGGAAAGATCAATCGCACTCCATTACATGTTGCTAATAACCCAGTTGGGCTGGATTCTACAGTTTTAGAGGTGACATCTCTAGTAGGAGTCGGGTCTGATGAGACGGTCAACATGGTAGGCATTTATGGAATCGGTGGAAAAGGTAAATTGACAGTTGCTCGTGCTGTGCATAACTTGATTGCTGATCAATTTGAAGGTTATGAGAATATTTCAAAACATGCAGTTTTTTATGCTCATGGCCTTCCATTGGCTTTGGAGGAATCAACATCGGAGCCTGGCAGACGCAGTAGATTATGGCTTAATGAGGATATTGTTCGTGTTTTGGAAGATAATAGGGTGTTTGAGTTGTTGAGCTTTCTGGATTTTGAAGGCTGCAAGTTCTTAACTGAACTACCTAGTTTATCTGGGGTAGCAAATTTGGGGGCACTGTGTCTTGATTATTGCACTAATTTAATTAGAATCCATCGCTCGATTGGGTTTCTTGATAGACTCATGTTATTGAGTGCTCAAGGATGCACCCAACTAGAAATTTTGGTACCCTGTATCAACTTGAGATCTCTAGAGACTTTGGATCTGAGGGGTTGCTCACGTGTTGAGGGCTTCCCAGAGGTATTGGGAGTGATGGAAAATATAAGAGAGATTTATTTAGACCAAACTGCCATAGAAGAATTGCCACTTTCAACTGGAAATCTTGTTGGGCGCCAACGATTGTTCTTGAGGGAATGCCAAAGGTTGATCCAGCTACCAAGTAGCATCTACATGTTGCCTAAACTTGAGATAATAACGGCTTATGGTCTCAGGGGATTTCGACCATCTGAAGATAAAGAAAAAAAATTCCCATGTTGTGATGCAAAACCTGACATGTATAATAACAATATGGTGTTGGATTTCAACTTCAATGTACTCATCGATGGTACTAAGCAATTCTGTTCTTCATGTAACTACATATTTTATGCACGAAGAATGACAGACCAAAAACTTCGGTGGGAATTACAATGCAAAGTGGAGGGGGTATTTTCAAAGCTTGAATGGAATCAAGTGGAGATTTCATGTGACATGGAATACCCCTTGCCATGTAGTTCTAAAAAGGTAATGGCCACCGAGTACAGGACCACTAGGACGATTCTAAAGTTGTCCCTCGTTTATGTCTACTTAGAAAACAATGAGGATTTCAAATGTGAAAATTATGATTATCCAGGAGGTGATGAAGAAGCCTAG 1374 0.4047 MAKHEQRFQDDKDKVQKWRDALRQAANVSGLHFQHGSQSEYKFIRKIVEVVSGKINRTPLHVANNPVGLDSTVLEVTSLVGVGSDETVNMVGIYGIGGKGKLTVARAVHNLIADQFEGYENISKHAVFYAHGLPLALEESTSEPGRRSRLWLNEDIVRVLEDNRVFELLSFLDFEGCKFLTELPSLSGVANLGALCLDYCTNLIRIHRSIGFLDRLMLLSAQGCTQLEILVPCINLRSLETLDLRGCSRVEGFPEVLGVMENIREIYLDQTAIEELPLSTGNLVGRQRLFLRECQRLIQLPSSIYMLPKLEIITAYGLRGFRPSEDKEKKFPCCDAKPDMYNNNMVLDFNFNVLIDGTKQFCSSCNYIFYARRMTDQKLRWELQCKVEGVFSKLEWNQVEISCDMEYPLPCSSKKVMATEYRTTRTILKLSLVYVYLENNEDFKCENYDYPGGDEEA* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03079 457 Gene3D Ribonuclease Inhibitor 230 334 IPR032675 -
Rops11g03079 457 Gene3D Ribonuclease Inhibitor 153 229 IPR032675 -
Rops11g03079 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 143 IPR027417 -
Rops11g03079 457 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 121 IPR044974 GO:0006952
Rops11g03079 457 Gene3D - 53 126 IPR027417 -
Rops11g03079 457 Gene3D - 1 52 IPR035897 -
Rops11g03079 457 SUPERFAMILY L domain-like 155 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03079 Rops-Chr11 55070133 55073595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03079 149 333 WRKY Transcription Factor Family AT4G12020 33.514 1.05e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03079 - - mtr:11415136 259.61