Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03076 ATGACACAGTCAACACTACCTTCTCCGTCTTCCTTCACCTGTGATTGGACTTATGATGTCTTCCTCAACTTTAGAGGTATCGATACCCGCCAAAATTTCACTAGTGATCTCTACCATGCTCTGGATCAAAAGGGTATCCGCACCTTCATCGACAATATAGGGCTTAAGAGAGGAGAAGAAATCACGGCAACACTTCTCCAAGGCATTAAAGAATCCAGGATTTTCATTGCTGTTTTCTCCAACAACTATGCATCCTCAGCATATTGTTTGGATGAACTTGTCGCGATCCTTGAGTGCTTGGAGACACAAGGAAGGTTATTTTTGCCTGTTTTTTATGGAGTGGATCCATCACAAGTTCGGCACCAAAGAGGGACCTACGCAGAAGCTTTGGCAACACATGAGGTGAGGTTTCAGGATGACAAGGACAAGGTGCGAAAATGGAGGGGTGCTTTACGTCAAGCTGCAGATGTGTCTGGCTGGCATTTCCAACACGGGTCTGAATCAGAATATCAGTTTATAACAAAGATCACTGACGAGGGATCTGATACAATTGAAGTCATAGCTCTGGAATCGTGGAGAGACAAAGTGATATGGAATGGAAAATCATTCAAGAAAATGAAAAACCTGAAAATTCTCATTATCGAAAATGCACGCTTTTCACAAGGCCCTGGAAATCTACCAAATAGTTTGAGAGTGTTAGAGTGGATTGGTTATCCGTCACCATCTCTACCATCTGATTTTAATCCAAGGAATCTGGTGGTGTTCACCCTACCTAAAATTTGCCTTAAATCATTCAAATCACTCGAGGTGTTTGAGTCGTTGATCTCTCTGGATTTTACACGCTGCGAGGTCTTAACCAAACTACCTAGTTTATCTGGGTTACCAAATTTGGATGAATTGTGCCTAGATTATTGCTCTAATTTAATTAGGATCCATGACTCGGTTGGGTTTCTTGATAGACTCGTGTTACTGAGCGCTCAAGGATGCTACCAACTACAAACTTTTGTACCCTCTATCAACATGACATCTCTAAAGACTTTGAATCTTAGTGAATGCTTACGTCTTAAGAGCTTCCCAGAAGTATTGGGAGTGATGGAGAATATAAGAGAGGTTTATTTAGACTGGACTGCAATAGAAGAATTGCCACTTTCAATTGGAAATCTTGTTGGGCTCGAACGGTTGTTCTTGAGGATGTGCCTAAATCTGATTCAGCTACCAAGTAGCATCTACATGTTGCCTAATCTTGAGATAATATTGGCTTATCATTGTTGGGGATTCCGATTATCTGAAGATAAAGAAATAGTGAGCTCAAGAGTGTTTCCAAACAGCATGTGTGTTTATTATGAACATAGGAGGATCTTCCTTGACGTGTATTCTTATAATATAAGCCCCGGTATTGTCATAGAAGTACGTAGTCCTTCGTGGAATCCCTCCTGTTACCATTTTGAGAGGCATTTACAAGGGAGAGAAGATTGGATAGAATTCCGGAGCAAGCAACCATCTGTAGGTTTTTGTTTCCAAAAGAAATTCCCCGCCATAGGTCTATTATGTGTTGCAAATCTTAGCATGGATGGTGAAACGATGTTTGATTTCAAGTTCAGTGTACTCATCAATGGCACTAAGCAATTCAGTTCTTCATGTAACTACATATATCATCCAAAAGGTTTGACGGAGCTACCATTTTTCTGTGATCTACAATGCAAAGTGGAGGGGGTATTTTCAGAGCATCAATGGAATCAAGTGGAGATTTTATGTGAGATGAAATATACCAGGCCATGCAGTTATAATAGGGTAACGGGGACCCTAGACGGGGCCACTATGGGGATTATAAAGGAGGTGTGTCTTTATTTCTACTTGGATAACAATAACAACAAGGGGATTTCAAATTTGAAAATCCCGATCTCCCTCTGCCAAGAGCCTGCACTGTCATATAGTACTGCACTTATGGTAGGAGAGTTAATGAATGCTGTTAAGGGGTCTAGCCTTGGAAGTTCTGATGTAGAGGACTTGGAATGCAGTATCTAG 2025 0.4109 MTQSTLPSPSSFTCDWTYDVFLNFRGIDTRQNFTSDLYHALDQKGIRTFIDNIGLKRGEEITATLLQGIKESRIFIAVFSNNYASSAYCLDELVAILECLETQGRLFLPVFYGVDPSQVRHQRGTYAEALATHEVRFQDDKDKVRKWRGALRQAADVSGWHFQHGSESEYQFITKITDEGSDTIEVIALESWRDKVIWNGKSFKKMKNLKILIIENARFSQGPGNLPNSLRVLEWIGYPSPSLPSDFNPRNLVVFTLPKICLKSFKSLEVFESLISLDFTRCEVLTKLPSLSGLPNLDELCLDYCSNLIRIHDSVGFLDRLVLLSAQGCYQLQTFVPSINMTSLKTLNLSECLRLKSFPEVLGVMENIREVYLDWTAIEELPLSIGNLVGLERLFLRMCLNLIQLPSSIYMLPNLEIILAYHCWGFRLSEDKEIVSSRVFPNSMCVYYEHRRIFLDVYSYNISPGIVIEVRSPSWNPSCYHFERHLQGREDWIEFRSKQPSVGFCFQKKFPAIGLLCVANLSMDGETMFDFKFSVLINGTKQFSSSCNYIYHPKGLTELPFFCDLQCKVEGVFSEHQWNQVEILCEMKYTRPCSYNRVTGTLDGATMGIIKEVCLYFYLDNNNNKGISNLKIPISLCQEPALSYSTALMVGELMNAVKGSSLGSSDVEDLECSI* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03076 674 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 182 IPR044974 GO:0006952
Rops11g03076 674 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Rops11g03076 674 Gene3D Ribonuclease Inhibitor 184 443 IPR032675 -
Rops11g03076 674 SUPERFAMILY L domain-like 198 430 - -
Rops11g03076 674 Pfam TIR domain 18 178 IPR000157 GO:0007165
Rops11g03076 674 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 185 - -
Rops11g03076 674 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Rops11g03076 674 SMART till_3 17 157 IPR000157 GO:0007165
Rops11g03076 674 Gene3D - 14 183 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03076 Rops-Chr11 55012304 55017161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03076 176 423 WRKY Transcription Factor Family AT4G12020 36.604 9.49e-36 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03076 - - mtr:11441658 470.7