Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03066 ATGGGTGAGGCTTGTTCAAGAATGGACCTCACTGCAATACACCAGATTTTGGTTGCCACACACTACAGAGATGATGAAGGGACTAATGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAGGATTTTAAGACAACCACTGATAATTATTCCCAGTTCATTGATGTGGGAACGATGGCTTATGTGCATGTTAGGGATGTGGCATTAGCCCACATACTTGTTTATGAGAAGCCTTCTACTTCTGGTCGATACATATATGCTGAAAGTCCACTGCACCGAGGAGAGCTAGTTGAAATTCTTGCCAAGGTGCAGAGGGCTGTTTGTATGATTTCCAACTCCACAACACAAGGGAGCACCATGTTTTGCAAGTCTCATGGTGGTGGGAAGTGTTGCTCATTCGCGGGTTGCACCAAGAGTGCACGTAGGGGTGCTGATGGTGGTGTTCAGCATGATGGGACACTTCGTTTGACTACCAGACAAACGTTTCAGCTCCGTGGTGTTGTCAAGAAGGACCTTAAAACCGTGATGAGCACCATTAGCAGAAATATAGGTTCAAGTCTTGGTGCATGTGGTGACCAAAACAGGAATGCACTTGCTCCAACTGATTTATGGACCCCAGAGCCCCACCATGGTTGTTGCGCCAACATGCCACAGTGCATGCATGAACGTAGGAGATGGCTACCGCCTCCCCCAGTGTTGCAACTCAACCTCTTTTGTGGTGTATTATAA 777 0.4736 MGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTTTDNYSQFIDVGTMAYVHVRDVALAHILVYEKPSTSGRYIYAESPLHRGELVEILAKVQRAVCMISNSTTQGSTMFCKSHGGGKCCSFAGCTKSARRGADGGVQHDGTLRLTTRQTFQLRGVVKKDLKTVMSTISRNIGSSLGACGDQNRNALAPTDLWTPEPHHGCCANMPQCMHERRRWLPPPPVLQLNLFCGVL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03066 258 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 79 IPR045845 GO:0004672|GO:0009742
Rops11g03066 258 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 166 206 IPR036136 GO:0016491
Rops11g03066 258 Gene3D - 28 140 - -
Rops11g03066 258 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 74 119 IPR036291 -
Rops11g03066 258 Gene3D Sulfite Reductase Hemoprotein;Domain 2 147 225 - -
Rops11g03066 258 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 167 194 IPR005117 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03066 Rops-Chr11 54493177 54494099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03066 74 119 Monolignol Biosynthesis Gene Families AT1G15950 76.087 3.04e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03066 K14500 - gmx:100808907 154.066