Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03064 ATGATGACACAGGCAACACTACCTTCTCCATCTTCCTTCACAAACTGTGATTGGCCTAATGATGTCTTCCTCAACTTTAGAGGTGAAACTCGCGAAAAGTTCACTAGTGATCTCTACGATTCTCTTCAGAAAAAGGGTATCAACACCTTTATCGACGATAAAGGGCTTAGGAGAGGAGAAGTAATCACGCCAGCTCTTCTCCAAGCCATTAAACGATCCAGGATTTTCATTTCTATTTTCTCCAACGACTATGCATCCTCAACATATTGTTTGGAGGAACTTGTCACGATCCTTGAATGCCTGGAGACACCAGGAAGGTTATTTTTGCCTGTTTTTTATGGAGTGGATCCATCACAAGTTCGGCACCAAAGTGGGACCTACGCAGAAGCTTTGGCAGCACATGAGGTGAGGTCTGAAACAGAATATCAGTTAATATCAAAGATCACTGACGAGGTCTCTAAAAAAATCAACCGCATTCCTTTACATGTTGCTAAAGTACCAATTGGGCTGGAATCTCGAGTTTCAGAAGTGACATCTCTCCTAGGACTTGAGTCTTATGAGGGAGTCAACATGGTAGGCATTTATGGAATCGGTGGAGTAGGTAAATCAACAGTTGCTCGTGCTGTGCGTAACTTGATTGCGGATCAATTTGATGGTTTGTGTTTCCTCACTGACATAAGAAGAAGGGCAAATAGTGATCATGATCTTGCACAACTCCAACAAACACTACTTAATGAAATACTCGACGACCAAGATATTAAAGTGAGAGATCTTTACATGGGAATTTCAATAATAAAAAAGAGGCTTCAGCAAAAGAAGGTCCTTTTGATTCTTGATAATGTTGACAAACTGAAACAGCTGGAGGCACTCGCGGGAGGACATGATTGGTTTGGCTCTGGTTATGTGGATGTTTCAAAGCGTGCAGTTTTTTATACTGATGGCCTTCCATTGGCTTTGGAGGTGATTGGTTCTTACTTGTTTGGCAAAAGTTTAGATGTGTGGAAATCTGCATTAGAGAAGTATAAAAGAGTTCTTCCTAGAGAGATCCATGAAATACTTAGAGTTACCTATGATGATTTGGAAGAAGATGAGAAGGGTATTTTTCTTGACATCGCTTGTTTCTTCAATTCTTATGAAATGGGCTATGTCAAAGGAATGCTATGCTTACATGGTTTTCATGTGGAAAATGGCATTCAAGTGCTGACCGACAAATCACTCATAAAAATTGGCAATGATTGTGTGAGAATGCATGACTTAATTCAACACATGGGCAGAGAAATTGTAAGGCAGGAATCCACATGGGAGCCTGGCAGGTGCAGTAGATTATGGCTTAATGAGGATATTGTTCATGTCTTGGAAGATAATACGGTGTCAAAGTCGAAGTCGTTGCGTTTTCTGGATTTTGGAGGCTGCAAGTTCCTAACTGAACTACCGAGTTTATCTGGAGCTCCAAATCTGGGGGCACTGTGTCTTGACAATTGCACTAATTTAGTTAGAATCGATGCCTCGGTTGGGTTTCTTGATAGACTCGTGTTATTGAGTGCTCGAGAATGCACCCAACTAGAAATTTTGGTGCTGTGTATCAACTTGAGATCTCTAGAGACTTTGGATCTTACGGGTTGCTCAAGTCTTGAGAGCTTCCCAGAAGTAGTGGGAGTGATAGAGAATACAAGAGAGGTTTATTTAGACCAGACTGCCATACAAGAATTGCCACTTTCAATTGGAAATCTTGTTGGGCTCCAACGATTGTTCCTGAGGAGATGCCAAAGGCTGATCCTGCTACTAAGTAGCGTCTACAATTTGCCTAAACTTGAGATAATAATGGCTTATGATCGTGAGGTATTTCGACCATATGAAGATGAAGGAAAGAAGTATGTAATCCCCATCAGCTTGCGGATCATGAAGTTATTATATCCCGGAAGATAG 1926 0.4123 MMTQATLPSPSSFTNCDWPNDVFLNFRGETREKFTSDLYDSLQKKGINTFIDDKGLRRGEVITPALLQAIKRSRIFISIFSNDYASSTYCLEELVTILECLETPGRLFLPVFYGVDPSQVRHQSGTYAEALAAHEVRSETEYQLISKITDEVSKKINRIPLHVAKVPIGLESRVSEVTSLLGLESYEGVNMVGIYGIGGVGKSTVARAVRNLIADQFDGLCFLTDIRRRANSDHDLAQLQQTLLNEILDDQDIKVRDLYMGISIIKKRLQQKKVLLILDNVDKLKQLEALAGGHDWFGSGYVDVSKRAVFYTDGLPLALEVIGSYLFGKSLDVWKSALEKYKRVLPREIHEILRVTYDDLEEDEKGIFLDIACFFNSYEMGYVKGMLCLHGFHVENGIQVLTDKSLIKIGNDCVRMHDLIQHMGREIVRQESTWEPGRCSRLWLNEDIVHVLEDNTVSKSKSLRFLDFGGCKFLTELPSLSGAPNLGALCLDNCTNLVRIDASVGFLDRLVLLSARECTQLEILVLCINLRSLETLDLTGCSSLESFPEVVGVIENTREVYLDQTAIQELPLSIGNLVGLQRLFLRRCQRLILLLSSVYNLPKLEIIMAYDREVFRPYEDEGKKYVIPISLRIMKLLYPGR* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03064 641 Pfam TIR domain 21 140 IPR000157 GO:0007165
Rops11g03064 641 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 136 IPR035897 -
Rops11g03064 641 Gene3D Ribonuclease Inhibitor 439 611 IPR032675 -
Rops11g03064 641 PRINTS Disease resistance protein signature 191 206 - -
Rops11g03064 641 PRINTS Disease resistance protein signature 528 544 - -
Rops11g03064 641 PRINTS Disease resistance protein signature 268 282 - -
Rops11g03064 641 Pfam NB-ARC domain 185 289 IPR002182 GO:0043531
Rops11g03064 641 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 300 IPR044974 GO:0006952
Rops11g03064 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 371 IPR027417 -
Rops11g03064 641 Gene3D - 14 157 IPR035897 -
Rops11g03064 641 ProSiteProfiles TIR domain profile. 18 156 IPR000157 GO:0007165
Rops11g03064 641 SMART till_3 19 155 IPR000157 GO:0007165
Rops11g03064 641 SUPERFAMILY L domain-like 434 608 - -
Rops11g03064 641 Gene3D - 158 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03064 Rops-Chr11 54451644 54471511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03064 436 607 WRKY Transcription Factor Family AT4G12020 36.416 8.51e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03064 - - mtr:11415136 599.742