Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03054 ATGCAGCACCAGGAAGGAGTAAGCCAACACTATCTTCTCCATAAGTTCACCAGTGATCTCTACGATTCTCTTAAGAAAAAGGGTATCCACACATTCATTGACGATAAAGAGCTTAGGAGAGGAGAAGTAATCACGCCAGCTCTTCTCCAAGCCATTAAAGAATCCAGGATTTTCGTTTCTGTTTTCTCCAAAGACTATGCATCCTCAACATATTGTTTGGAGGAACTTGTCACAATCCTTGAATGCCTGAAGACACCAGGAAGGTTATTTTTGCCTGTTTTTTATGAAGTGGATCCATCACAAGTTCGGCACCGAAGAGGGACCTACGCAGATGCTTTGGCAGCACATGAGGTGAGGTTTCAGGATGACAAGGACAAGGTTCAAAAATGGAGGGATGCTTTACGTCAAGCTGCAGATGTGTCTGGCTGGCATTTTCAACACGGGTCTGAATCAGAATATAAGTTTATAACAAAGATCACTGACGAGGTCTTTAAAAAGATCAACCGCATTCCTTTACATGTTGCAAATAACCCAGTTGGACTGGATTCTCGAGTTTTAGAAGTGACATCTCTCCTAGAACTCGATTCTGGTGACAGAGTCAACATGGTAGGCATTTATGGAATCGGTAGAGTAGGTAAATCAACAATTGCTCGTGTTGTGCATAACTTGATTGCTGATCAATTTGAAGGTGTGTGTTTTCTTGCCGACGTAAGAGAAAGTGCAAGTAAACATGGTCTTGAACAACTCCAGGAAAGACTACTTAATGAAATACTCGGGGAAAAAGATATTAAAGTGGGAGATGTTTACAAAGGAATTTCCATAATAAAAAAGAGGCTCCATCAAAAGAAGGTCCTTTTGATTCTTGATGATGTTGACAAACCGAAACAGTTACAGGTACTCGCAGGAGGACATGATTGGTTCAGCTATGGCAGCAGCATCATAATCACAACAAGAGAAAAGCATTTGCTTGACACTCATGGGGTTGTGAAACCATATGAGGTTAAATCGTTGAATGATGAAAAAGCTCTGGAATTGTTTAGTTGGCATGCCTTTAAAAGTAACAAAATTGATCCAGGTTATGTGGATATTTCAATACTTGCAGTTTCTTATGCACATCGCCTTCCATTGGCTTTGGAGGTGATTGGTTCTCACTTGTTTGGCAAAAGTTTGGATGTATGGAAATCTGCATTAGATAAATATGAAAGAATTCTTCCGGAAGAGATCCACAAAATACTTAGAGTTAGCTATGATGATTTGGAAGATGATGAGAAGGGTATTTTTCTTGACATCGCTTGTTTCTTCAATTCTTACAAAATGGACCATGTCAAAGGAAGACTATACTTACATGGTTTTCATGCGGAAAATGGCATTCAAGTGTTGATTGACAAATCTCTCATAAAAATTGATGGCAATGGTTGTGTGAGAATGCATGACTTAGTTCAAGACATGGGCCGAGAAATCGTAAGGCAGGAATCAACATTGGAACCAGGCAAACGTAGTAGATTATGGTTAAAGGAGGACATTGTTCATGTTTTGGAAGAAAATACGATGTTTCAGTCGTTGAGCTGTCTAGATATTGGAGGCTGCATGTTCTTAACTGAACTACCTAGTTTATTTGGGTTACCAAATTTGGTGTCATTGTATCTAAATGATTGCTCTAATTTAATTAAGATCCATGACTCGGTTGGGTTTCTTGATAGACTCGTGACACTGAGCGCTCGAGGATGCATCAAACTAGGAATTTTGGTACCCTCTATCAACTTGACATCGCTAGAGACTTTGGATCTTAGTGGTTGCTCACGTCTTGAGAGCTTTCCAGAAGTATTGGGAGTGATGGAGAATATAAGAGAGGTTTATTTGGACAAGACTGGCATACGAGAATTGCCACTTTCAATTGGAAATCTTGTTGGGCTCGAACGATTGTTCGTGAGGGCATGCACATATCTGATGCAGCTACCAAGTAGCATCTACAAGTTGCCTAATCTTGAGATAATAACGGATTATGGTTCTATGGGATTCCAATTATCTGAAGATAAAGAAAGAGTGATCTCAAAAGTGTTTCCAAATGTCATGTTTGTTTATCATGAAATGTCTGAGTTTTTCCTTAACGTGTATTCTCATAATATAAGCCCCGATAATGTCGTAGAAGTATGTAGTCCTTCGTGGGATCCTACTCCTATGTGGAATCCCTACCAGGACCATCTTGATTTTACTTTTCTTAGAAGGCCTTTACGAAGGGATAGGAGAAAATACCAAAGGCCTTTACAAGAGAGAGCAGATCGTTCAAGATACCGATTGCATATACAAGGGAGAGGAGATTGGATAAGAATCAGGAGCAAGCAACCATCTGTGGGTTTTTGTTTTCGAAAGAAATTCCCCACCATAGGTCTATCTTGTGTTACAAATCCTGGCATGGATGGTGAAAAGATGGTGTTGGATTTCAAGTTCAGTGTACTCATCAATGGCACTGAGCAATTCAGCTCTTCATGTAACTACTTATATCAACCAACGATGGAGCAACATTTTCTCTGTGATCTACGATGCAAAGTGGAGGGGGTATTTTCAGAGCATGAATGGAATCAAGTGGATATTTTATGTGAGGTCAAGTATCCCATGGTTCCATGTAGTTCTGAAAGGGTAATGGCCACCCAGGACCGGACCACCACGGGGATTATAAAGGAGGTGTGTATTTATTTCTACATAGATAACAACGAGGACGATTTCAAATTTGAAAATCTCAAACTCAATCACCCTCTACCAACAGGTCAGAAATGTCAATAG 2781 0.3999 MQHQEGVSQHYLLHKFTSDLYDSLKKKGIHTFIDDKELRRGEVITPALLQAIKESRIFVSVFSKDYASSTYCLEELVTILECLKTPGRLFLPVFYEVDPSQVRHRRGTYADALAAHEVRFQDDKDKVQKWRDALRQAADVSGWHFQHGSESEYKFITKITDEVFKKINRIPLHVANNPVGLDSRVLEVTSLLELDSGDRVNMVGIYGIGRVGKSTIARVVHNLIADQFEGVCFLADVRESASKHGLEQLQERLLNEILGEKDIKVGDVYKGISIIKKRLHQKKVLLILDDVDKPKQLQVLAGGHDWFSYGSSIIITTREKHLLDTHGVVKPYEVKSLNDEKALELFSWHAFKSNKIDPGYVDISILAVSYAHRLPLALEVIGSHLFGKSLDVWKSALDKYERILPEEIHKILRVSYDDLEDDEKGIFLDIACFFNSYKMDHVKGRLYLHGFHAENGIQVLIDKSLIKIDGNGCVRMHDLVQDMGREIVRQESTLEPGKRSRLWLKEDIVHVLEENTMFQSLSCLDIGGCMFLTELPSLFGLPNLVSLYLNDCSNLIKIHDSVGFLDRLVTLSARGCIKLGILVPSINLTSLETLDLSGCSRLESFPEVLGVMENIREVYLDKTGIRELPLSIGNLVGLERLFVRACTYLMQLPSSIYKLPNLEIITDYGSMGFQLSEDKERVISKVFPNVMFVYHEMSEFFLNVYSHNISPDNVVEVCSPSWDPTPMWNPYQDHLDFTFLRRPLRRDRRKYQRPLQERADRSRYRLHIQGRGDWIRIRSKQPSVGFCFRKKFPTIGLSCVTNPGMDGEKMVLDFKFSVLINGTEQFSSSCNYLYQPTMEQHFLCDLRCKVEGVFSEHEWNQVDILCEVKYPMVPCSSERVMATQDRTTTGIIKEVCIYFYIDNNEDDFKFENLKLNHPLPTGQKCQ* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03054 926 PRINTS Disease resistance protein signature 278 292 - -
Rops11g03054 926 PRINTS Disease resistance protein signature 371 385 - -
Rops11g03054 926 PRINTS Disease resistance protein signature 586 602 - -
Rops11g03054 926 PRINTS Disease resistance protein signature 202 217 - -
Rops11g03054 926 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 143 IPR035897 -
Rops11g03054 926 Gene3D Ribonuclease Inhibitor 585 666 IPR032675 -
Rops11g03054 926 Gene3D Ribonuclease Inhibitor 502 584 IPR032675 -
Rops11g03054 926 Gene3D - 171 330 IPR027417 -
Rops11g03054 926 Gene3D - 8 170 IPR035897 -
Rops11g03054 926 Pfam TIR domain 14 169 IPR000157 GO:0007165
Rops11g03054 926 SMART till_3 2 140 IPR000157 GO:0007165
Rops11g03054 926 Pfam NB-ARC domain 194 417 IPR002182 GO:0043531
Rops11g03054 926 ProSiteProfiles TIR domain profile. 1 167 IPR000157 GO:0007165
Rops11g03054 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 430 IPR027417 -
Rops11g03054 926 Gene3D - 416 487 IPR036388 -
Rops11g03054 926 Gene3D - 336 415 IPR042197 -
Rops11g03054 926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 671 IPR044974 GO:0006952
Rops11g03054 926 SUPERFAMILY L domain-like 475 666 - -
Rops11g03054 926 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03054 Rops-Chr11 54093748 54101999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03054 501 681 WRKY Transcription Factor Family AT4G12020 35.912 2.48e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03054 - - mtr:11415136 924.465