Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03051 ATGGATGAAGATACACTTAATTTCTTTACATTAAGGGATTTGTGCAAGATTCATGGGTATCCCAGTATTGAACGTTTCTACTGGTTGGTCCTTGACAAGGACTTGGAAGGTGGGTTAAGAGAGGTGGTTAGGGATTCCGATATCGTGGATATTTGTGCTGCTTCAAAGCGAAACAATCGTGAAATTGATATTTTTGTGGAACATCTTATTTCCATCCCAGTTGTAGTTGCACCTGATGAGACTGCTGGAATTGATCACAATGCACACTCTACTAGTAATGAAACTGTTGGACATGTTGATTTACATGAAGAACATGGAGATGAGGATGAGGATGATGACAATTCTAACAGTTGTTATGATGATGGAGGTGCACCACCCCCTGGATTTAGGCCAAATGTTGCTATTCGACCACCTCCCATCAGACCTCCAGCATTGAGCACATCATCTGCACAAAGGCCAATGGGAACTTCCAACACTAAACATGTTGCAAGGAGTTGTAATTTGAATTCTAGACCTACTGCAGGGAGCTTCACATCTGCAACTGCCAATTTTGAAACTGAAAGCATGAGGCTTTCTTCTTCTGGACATAATCAACCGGCTCAAGAAGCCTGTGATTTTGCAGGGGAGAAAAAATGTTTGAATTCTGAACTTTGGCATGCTTGTGCTGGTCCTCTGGTTTCTTTGCCACCTGTTGGAAGTCGTGTAATCTACTTTCCACAAGGTCACTGTGAGCAGGTTGCTGCTTCAACCAAGAAGGAAGTAGATGTACATATTCCAAATCACCCCGACTTGCCACCACAGCTTATTTGTCAACTGCACAATGTGACAATGCATGCGGACATTGAAACGGATGAAGTATATGCTCAAATGACTCTGCAACCTCTAAGTCCACAAGAGCAGAAGGATGTGTATCCACTGCCTGCAGAATTGGGTACTCTAAGCAAACAGCCAACCAACTACTTCTGTAAGACCTTAACTGCAAGTGATACCAGCACACATGGAGGATTTTCTGTTCCTCGAAGAGCAGCTGAAAAAGTTTTTCCTCCTCTTGATTACTCCCAGCAGCCTCCTGCACAAGAACTAATTGCTAGAGATCTTCATGATAATGAATGGAAATTCAGGCATATATTTTGA 1134 0.4268 MDEDTLNFFTLRDLCKIHGYPSIERFYWLVLDKDLEGGLREVVRDSDIVDICAASKRNNREIDIFVEHLISIPVVVAPDETAGIDHNAHSTSNETVGHVDLHEEHGDEDEDDDNSNSCYDDGGAPPPGFRPNVAIRPPPIRPPALSTSSAQRPMGTSNTKHVARSCNLNSRPTAGSFTSATANFETESMRLSSSGHNQPAQEACDFAGEKKCLNSELWHACAGPLVSLPPVGSRVIYFPQGHCEQVAASTKKEVDVHIPNHPDLPPQLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKDVYPLPAELGTLSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03051 377 MobiDBLite consensus disorder prediction 130 144 - -
Rops11g03051 377 MobiDBLite consensus disorder prediction 104 170 - -
Rops11g03051 377 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 209 377 IPR044835 GO:0003677|GO:0006355|GO:0009725
Rops11g03051 377 CDD B3_DNA 320 377 IPR003340 GO:0003677
Rops11g03051 377 MobiDBLite consensus disorder prediction 145 170 - -
Rops11g03051 377 SUPERFAMILY DNA-binding pseudobarrel domain 306 377 IPR015300 -
Rops11g03051 377 Gene3D - 319 377 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03051 Rops-Chr11 54010914 54032308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03051 189 377 B3 DNA Binding Superfamily AT1G30330 84.656 3.05e-106 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03051 - - dzi:111293207 353.984