Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03049 ATGTTACTGAATGGGGAAGAGGTGAAAACAGATGAAGAACGTGATGGAGTGCGAGAAAGGTCTTTCAAGCGCACACGACCTCACTCCGCTTTCTCATTTGTTGATCTTGTCGGAGCTGGCATCAGCGTTCAACATCTCGCTCGAGCCCACTCGCTCTTAAAGGTATACCACGTCTCATCAACCAGTGAGCAATTGCGTCATTCATTAGATTTTTCAGTGAAACGGTTAGTCCTACCAGCTGCTGATGAAGCTGAATCAATATGGACCAGTAAATTTGGGTTTACAAAGCTAGGCAAAGAAGAGATAAACAATTATAAGAGATGGAAACAAGATATTGAGGTGGATAATGAGAAAACAAGAGGTTCTGCTGAGTGGGGTGGGGATGGACTTATTGGTTTGCCTGGCCTCGGGCTTAGGAGCAAACAAAAGAGCCTTGCAGAAATTGATGGATAG 453 0.4459 MLLNGEEVKTDEERDGVRERSFKRTRPHSAFSFVDLVGAGISVQHLARAHSLLKVYHVSSTSEQLRHSLDFSVKRLVLPAADEAESIWTSKFGFTKLGKEEINNYKRWKQDIEVDNEKTRGSAEWGGDGLIGLPGLGLRSKQKSLAEIDG* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03049 150 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03049 Rops-Chr11 53991646 53993152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03049 63 110 PHD Transcription Factor Family AT3G53680 54.167 3.42e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03049 - K17943 pcin:129313514 65.0846