Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03048 ATGGCCAAGCATAGTTCTAGAGTCACTTATGTTTCTTATGTATCTTTTATTCTTGCATGCATGTTTTCCCTATCTTGTGAGGCTGTTGCTGAAAATCCAAAACTTCATATTGTGTATATGGGCTCCCTACCCAACAGACCTTATTCTCCAACCTCTCACCATCTCAACATGCTGCAACAAGTCTTTGATGGCAGAAATTCAACAAATTCCCTTATTCATAGTTACAAGAGAAGTTTCAATGGGTTTGCTGCGATGCTCACTGATCAACAAAAGCGAAAGATTAGTGAGATGGAAGGTGTAGTCTCAGCTTTCCCAAGCAAAACTCTTCAAACACAAACAACAAGATCTTGGGACTTCATGGGGTTTCCTCAATCAGTCAAACGTAGCCATACTGTTGAGAGTGATGTTGTGATTGGACTTATTGACTCTGGAATCTGGCCAGAATCTGAGAGTTTCAGTGATCATGGTTTTGGTCCCATTCCCAAAAAATGGAAAGGTATTTGTGCGGGTGGAAAGAACTTCACTTGCAACAAGAAGATTATTGGAGCAAGGTTCTATGTAGATGATGAGTCTACTAGAGACCTTCAAGGCCATGGAAGCCACATAGCATCAATAGCAGCAGGAAACCAAGTTAACAATGCGAGCTTTTATGGATTAGCACAAGGCACTGCAAGAGGAGGGGTTCCATTGGCAAGAATTGCTGCATATAAAGTATGTTTGATGGGTTGTAGTGAAGCTGCTATCTTGGCAGCTTTTGATGATGCCATAGCAGATGGGGTTGACATCATTTCCATTTCAATTGGTTATAATGGAGGAGCAATGGACTTTGATAAAGATGTTATTGCAATAGGTTCATTTCATGCAATGGGAAAAGGAATTCTCACAGTGCATGGTGTAGGCAATGATGGTCCTAATCCAGGCACAGTTACAAGCGTGGCACCATGGATGCTATCTGTTGCAGCAAGTACCATAGATCGTCAAATCATTGACAAGCTTGTTCTAGGAAATGGAAAAACACTAACTGGGAAATCAATAAACTCTTTTCCATCAAATGGAACAAAATTTCCCCTCGCTACGTGGGATGGTGATTCAAATGAGTTCGTGAAAGGAAAGATAGCTTTATGTGGTTATGATGATAGCAAAGGTGGAGAAGCTTATTCTAATGGGGCAGTTGGTACAATCCTCAAATTCACTGAAGGTTTTATACCTCAAGTTACAATATTTCCTTCTATGAAAATGTATTCTCATGACTATGCTCTTGTGGAATCATACAAAAATTCAACAAAAGACCCAAAAGGTGAAATACTCAAGAGTGAGACAATTACAGATCATACAGCCCCAACGATGGCAGAGTTTTCTTCTCGTGGACCAAATATCAAAGTTTCAGAAATTCTAAAACCAGATATCAGTGCCCCTGGAGTAGAAATATTGGCAGCATTTTCACCCGTTGCTCCACCCTCAGGTAATAGTTTAAAAGACCACAGATTTGTGAAATATAACATACTATCTGGAACATCAATATCATGTCCCCATGTTGCTGGAATAGCTGCATATGTGAAATCTTTTCACTTGGATTGGTCACCAGCAGCTATCAAATCAGCAATTATGACCTCAGCACAACGCATGAATGGTTCTGAGGATCAAATTGGTGAATATGCTTATGGATCAGGGCATGTCAATCCTGTGCAAGCTATTAATCCTGGCCTTATTTATGACATTGATAAGGAGGATTATACAGAAATGCTCTGCAATTTGGGTTATGAAAATGAAAAGATCAAAAAAATATCTGGTGAAAATATCCCTTGCTCTGGAACACCTGATAGATCCTTAGTAAGAAATCTTAATTATCCTGCACTTACAATTCAAGTTCAACCTGAGGCATCTTTCAATGTAAGGTTTAATAGAACAGTCACAAATGTTGGGTTAGCAAACTCAAATTACAGGGCAACTATATTGCCCAATCCACAGATCAACATTACAGTGGCACCTGAGATTCTGTCCTTCAAATCATTCAACGAGAAGCAGTCTTTTGTTGTCATCATCACTGGTGGTCATTTACCAAATAAAACTATGTTGAGCTCACAATTGATATGGTCAGATGACACCCACATTGTGCGGAGTCCAATTGTTGTGGATGTTTCTGATTAG 2148 0.3957 MAKHSSRVTYVSYVSFILACMFSLSCEAVAENPKLHIVYMGSLPNRPYSPTSHHLNMLQQVFDGRNSTNSLIHSYKRSFNGFAAMLTDQQKRKISEMEGVVSAFPSKTLQTQTTRSWDFMGFPQSVKRSHTVESDVVIGLIDSGIWPESESFSDHGFGPIPKKWKGICAGGKNFTCNKKIIGARFYVDDESTRDLQGHGSHIASIAAGNQVNNASFYGLAQGTARGGVPLARIAAYKVCLMGCSEAAILAAFDDAIADGVDIISISIGYNGGAMDFDKDVIAIGSFHAMGKGILTVHGVGNDGPNPGTVTSVAPWMLSVAASTIDRQIIDKLVLGNGKTLTGKSINSFPSNGTKFPLATWDGDSNEFVKGKIALCGYDDSKGGEAYSNGAVGTILKFTEGFIPQVTIFPSMKMYSHDYALVESYKNSTKDPKGEILKSETITDHTAPTMAEFSSRGPNIKVSEILKPDISAPGVEILAAFSPVAPPSGNSLKDHRFVKYNILSGTSISCPHVAGIAAYVKSFHLDWSPAAIKSAIMTSAQRMNGSEDQIGEYAYGSGHVNPVQAINPGLIYDIDKEDYTEMLCNLGYENEKIKKISGENIPCSGTPDRSLVRNLNYPALTIQVQPEASFNVRFNRTVTNVGLANSNYRATILPNPQINITVAPEILSFKSFNEKQSFVVIITGGHLPNKTMLSSQLIWSDDTHIVRSPIVVDVSD* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03048 715 ProSitePatterns Serine proteases, subtilase family, histidine active site. 198 208 IPR022398 -
Rops11g03048 715 Pfam Subtilase family 134 557 IPR000209 GO:0006508|GO:0008236
Rops11g03048 715 Gene3D - 325 442 - -
Rops11g03048 715 CDD Peptidases_S8_3 109 539 IPR034197 -
Rops11g03048 715 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 711 IPR045051 -
Rops11g03048 715 ProSiteProfiles Serine proteases, subtilase domain profile. 116 565 - -
Rops11g03048 715 CDD PA_subtilisin_like 332 435 - -
Rops11g03048 715 FunFam Subtilisin-like protease SBT5.3 25 112 - -
Rops11g03048 715 Pfam Peptidase inhibitor I9 36 111 IPR010259 -
Rops11g03048 715 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Rops11g03048 715 PRINTS Subtilisin serine protease family (S8) signature 503 519 IPR015500 -
Rops11g03048 715 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Rops11g03048 715 Gene3D - 582 714 - -
Rops11g03048 715 Gene3D Peptidase S8/S53 domain 135 578 IPR036852 GO:0004252|GO:0006508
Rops11g03048 715 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 111 IPR037045 -
Rops11g03048 715 SUPERFAMILY Subtilisin-like 114 566 IPR036852 GO:0004252|GO:0006508
Rops11g03048 715 ProSitePatterns Serine proteases, subtilase family, serine active site. 504 514 IPR023828 -
Rops11g03048 715 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Rops11g03048 715 Pfam Fibronectin type-III domain 613 711 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03048 Rops-Chr11 53987657 53989804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03048 17 711 Subtilisin-like Serine Gene Family AT5G58830 52.817 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03048 - - psat:127076787 825.083