Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03034 ATGAAGAATTCTAAGAGAACTGGTGTAAGGAAGTACCACAAATCTGAGAATCCACGCCTAAGATGGACACCTGAGCTCCATGAACACTTTGTTGAAACTGTGGAAAGGCTTGGTGGAAAACACAAGGCAACTCCAAAGCGCATTTTGCAGATGATGCATATGAAAGGACTAAGGATCTCTCACATTAAAAGCCATCTTCAGTTGATGACAAAAGTTCATCAAGAGCTATCTGATCCAATGTACAGAAGCATGAAGAGGTATACAATTCTCGAACCAATGTACCAGTTGCTTGATGAAAATGCCCAAGTTAACGATCTCCCGATCTGTCCCAATCGTTCACCCCAAAGATCACAGGGAACTAAATTAAGAGAATATTCACAAACCAGCGAAACTGATTATGATCTAAATCAGGAGCCTGACTCAAGTGCTTGCTTACTGAGTGATATGTCAAATGAAGACGAAAATAGTAGGACAATAAAATTTCTAGATCTCCCATTCTCTTTTAGCACTATGCACAGTGATCAAGAGAGAATGTGTTTTTCTTCATCAAATACAGCAGATAATAATCATGTTGCTCATTCTAGTTCTATACAATCTCACGGGAGCAATTACATAAATTTAGACCTAGCAATTTGA 636 0.3868 MKNSKRTGVRKYHKSENPRLRWTPELHEHFVETVERLGGKHKATPKRILQMMHMKGLRISHIKSHLQLMTKVHQELSDPMYRSMKRYTILEPMYQLLDENAQVNDLPICPNRSPQRSQGTKLREYSQTSETDYDLNQEPDSSACLLSDMSNEDENSRTIKFLDLPFSFSTMHSDQERMCFSSSNTADNNHVAHSSSIQSHGSNYINLDLAI* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03034 211 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 131 IPR046955 GO:0003700
Rops11g03034 211 Gene3D - 17 76 - -
Rops11g03034 211 MobiDBLite consensus disorder prediction 106 134 - -
Rops11g03034 211 NCBIfam myb-like DNA-binding domain, SHAQKYF class 17 68 IPR006447 GO:0003677
Rops11g03034 211 SUPERFAMILY Homeodomain-like 16 69 IPR009057 -
Rops11g03034 211 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Rops11g03034 211 MobiDBLite consensus disorder prediction 105 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03034 Rops-Chr11 53692436 53696456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03034 8 68 G2-like Transcription Factor Family AT1G14600 63.934 9.09e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops11g03034 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03034 - - gmx:100791958 267.7