Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03028 ATGGGTGGTGTTGAGAATGGAGAGTTCAGTGTGAGTGTGACTAATGAAGAGGTGGTGGCAGCAGTGTTACCAATGCAAGACCATTGGTTACCACTTTCTAACCTTGACCTTCTTCTACCTCAAGTGGATGTTGGAGTCTTCTTTTGCTACAAGAACCCAATGCTCACATCCACCACCTTATTAAAAGACATCGATACTAACAAAATGAGCTTTGGATCCATGGTGGGGTCTCTCAAGAAGGCATTGGCTCAAGCTTTGGTTTCTTACTATGCCTTTGCTGGTGAAGTGGTGCCCAACTCTGTGGGTGAACCTGAGCTGCTTTGCAATAATCGTGGGGTTGACTTTGTTGAAGCTGTGGCAGATGTTGAACTTCAGTGTCTCAACTTTTATAACCCTGATGACTCCATTGAAGGAAAGCTTGTTCCCAAGAAGAAACATGGCGTGCTTGCTGTCCAGGCAACTTCATTAAAGTGTGGTGGGATAGTAGTAGCAGGCACATTTGATCATCGTATAGCAGATGCCTATTCAGCAAACATGTTTCTCGTATCATGGGCCGAGATGGCCCAGCCTACTAAGCCCATCAAGCCCACAACTACCACCACCACCATTCACCGCCCATGTTTCCGTCGCTCCCTTCTCAACCCTCGCCACCCCGGTTCCATTCACCCTTCCATTCACCACATGTACATTCCCATCTCCGAACTCCCTCCTCCTCCTACCACCGCCACCACCCCATTACTCAGCCGTATATATTATGTCACGGCAGAGCAACTCCACCACATGCAATCACTCACCACCAACAATGGTTGCACCACTAAGCGCACAAAGCTTGAGTCTTTCTCTGCTTTCTTGTGGAAGATGATTGCTCGTGCAGCTTCAAGAGACGTGAATAACAAAAGGGTTATTGCCAAAATGGGCATAGTGGTTGATGGAAGGAAGAAACTTGGTAATGGTGGTGGTGATAAAGAGAGGGAAGCAATGATGAGTTGCTATTTTGGAAACGTACTTTCTATACCCTTTGGTGAGAAACTAGTGGAGGAGTTGGTAGAGGAGCCGTTGGGTTTGTTGGCGGATGAGATTCATGAATTCGTGGCGGTTGCGGCGACGGAGGAGCACTTCTTAGGGCTAATTGATTGGGTGGAAGCACACCGGCCGATCCCTGGTTTGGCGAGGATTTATTGCGGTGGAGCCGACCAGGGACCGGCTTTTGTGGTGTCTTCCGGGCAAAGGTTCCCGGCGGAGAAAGTGGATTTTGGGTGGGGGAAGGTTGTGTTTGCATCATACCATTTTCCATGGGGTGGTGAAGCTGGTTATGTGATGCCAATGCCAAGTCCTTTAGGGAATGGTGATTGGGTTGTGTACATGCACCTTGTGAAGGAGCAGTTGGAGGTTATAGAGTCTGAGGCTGCTCATGTCTTTAGGCCCTTAACTTGGGATTATCTTAATCAATGA 1452 0.4835 MGGVENGEFSVSVTNEEVVAAVLPMQDHWLPLSNLDLLLPQVDVGVFFCYKNPMLTSTTLLKDIDTNKMSFGSMVGSLKKALAQALVSYYAFAGEVVPNSVGEPELLCNNRGVDFVEAVADVELQCLNFYNPDDSIEGKLVPKKKHGVLAVQATSLKCGGIVVAGTFDHRIADAYSANMFLVSWAEMAQPTKPIKPTTTTTTIHRPCFRRSLLNPRHPGSIHPSIHHMYIPISELPPPPTTATTPLLSRIYYVTAEQLHHMQSLTTNNGCTTKRTKLESFSAFLWKMIARAASRDVNNKRVIAKMGIVVDGRKKLGNGGGDKEREAMMSCYFGNVLSIPFGEKLVEELVEEPLGLLADEIHEFVAVAATEEHFLGLIDWVEAHRPIPGLARIYCGGADQGPAFVVSSGQRFPAEKVDFGWGKVVFASYHFPWGGEAGYVMPMPSPLGNGDWVVYMHLVKEQLEVIESEAAHVFRPLTWDYLNQ* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03028 483 Gene3D - 232 468 IPR023213 -
Rops11g03028 483 Gene3D - 8 231 IPR023213 -
Rops11g03028 483 Pfam Transferase family 10 471 - -
Rops11g03028 483 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03028 Rops-Chr11 53526768 53531491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03028 20 466 Monolignol Biosynthesis Gene Families AT5G48930 25.806 1.51e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03028 - - gmx:100785067 731.095