Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03021 ATGAGACCAAGTGGAATGGAAAAAATGTACATATTGTGGTTCTTCTTTATTGAAATCTTGGTACAGTTTTCCATATCAAGCAGTGGCAAAGTTCCTGCTATAATAGTATTTGGAGACTCCTCTGTTGATTCAGGTAACAACAACTTCATTCCAACTATTGCTAAGAGCAACTTTGAGCCATATGGTCGTGATTTTCAAGATGGTTATCCTACTGGTCGATTCTCCAACGGTAGAATTGCCCCTGACTTCATTTCTGAGGCCTTTGGTCTTAAGCCAACAATTCCTGCTTACTTGGATCCTGCTTATAATATATCAGATTTTGCTACTGGTGTTTGCTTTGCTTCTGCTGGAACTGGATTTGACAATGCTACTTCAAAAGTTGCAGATGTCATACCTCTATTGAAAGAAGTTGAGTACTATAAGGACTACCAAATGAAATTGAGAGTACATCTTGGTGATGAGAAAGCTAATGAAATATTAAGGGAGGCTTTATATTTGATTAGCATAGGAACAAATGATTTTCTTGAGAACTATTACATACTCCCTGAACGTAGGTGCCAATTCACCACTGTTCAACAGTATGAGGATTTTCTCATTGGACTTGCTGAAAATTTCCTTAGGGAAATTTATGACCTTGGAGCAAGGAAAATTTCCCTTACAGGGTTGCCTCCTATGGGGTGTTTGCCACTGGAGAGGGCCATAAACATTTTGGATTACCATGGTTGTGTAGAGGGATACAATAATGTGGCTTTGGAGTTTAATGGAAAGTTGTCATGGTTGGTGACAAAGCTGAACAAGGACCTCCCTGGACTTCAATTGGTAGATGCAAATGCATATGATATTGTACTGCAAATCATTGAACAACCTTCTCAGTTTGGTTTTGATGTGGCAGCAGTGGGATGCTGTGGAACAGGAAGATTTGAGATGAGTTACCTTTGCGACCCCAAAAACCCATTTACCTGCACAGATGCAAATAAATATGTATTTTGGGATGCTTTTCACCCTTCAGAAAAAACAAGTCAGATAGTCTCAAATTATTTAATAGAAAAACATCTAGCAAAGTTTCGTTGA 1071 0.3866 MRPSGMEKMYILWFFFIEILVQFSISSSGKVPAIIVFGDSSVDSGNNNFIPTIAKSNFEPYGRDFQDGYPTGRFSNGRIAPDFISEAFGLKPTIPAYLDPAYNISDFATGVCFASAGTGFDNATSKVADVIPLLKEVEYYKDYQMKLRVHLGDEKANEILREALYLISIGTNDFLENYYILPERRCQFTTVQQYEDFLIGLAENFLREIYDLGARKISLTGLPPMGCLPLERAINILDYHGCVEGYNNVALEFNGKLSWLVTKLNKDLPGLQLVDANAYDIVLQIIEQPSQFGFDVAAVGCCGTGRFEMSYLCDPKNPFTCTDANKYVFWDAFHPSEKTSQIVSNYLIEKHLAKFR* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03021 356 FunFam GDSL esterase/lipase APG 24 352 - -
Rops11g03021 356 SUPERFAMILY SGNH hydrolase 34 349 - -
Rops11g03021 356 PANTHER GDSL ESTERASE/LIPASE EXL3 17 347 - -
Rops11g03021 356 Pfam GDSL-like Lipase/Acylhydrolase 34 347 IPR001087 GO:0016788
Rops11g03021 356 CDD SGNH_plant_lipase_like 32 350 IPR035669 -
Rops11g03021 356 Gene3D SGNH hydrolase 21 353 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03021 Rops-Chr11 53310552 53314006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03021 28 349 Pollen Coat Proteome AT1G75910 36.111 1.32e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03021 - - gmx:100778745 609.757