Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03015 ATGACTACCACCACAACCACTAGCACCACTCTTGGCAGGGACGAATCCATCGACTACGACAGCAGCAGTTTAGTCTCCCTTTGCTCCTCTGCCACTGACACCTCTCACTACGCCAAGCCCTACAAGGCCAACATTCAGCTGCTCTGCCGCCACAAGGGAACCCTCGGCCTCCACCACTTCCGCCTTCTTCGGCGGCTCGTCGGTGGCGACATCGAGAACGTCTACCTTTGCCAGATAAGGAACCCCATGGTGGGTTTGCCTCAATGTTTCTACACCATGCAAGTGGTTGACAGAGAAGCACTTGCCATAAGGAAGAAGCTTCAAAGAGTAGAGATGGAGAAGGAGATTCTTAGCATGATTGATCATCCCTTTTTGCCTACTTTATACGCTGAGTTGGATGCTCCTCATTACTCTTGCTTTGTCATGGAGTTTTGCCCTGGTGGAGATTTATATGCTGCTCGCCAACGCCAGCCAGGGAAACGCTTCAGCATCACATCCACTAGATTTTATGCAGCTGAGACACTTGTGGCACTAGAGTATCTCCATATGATGGGTATAATATACAGAGATTTGAAGCCAGAGAATGTGTTGACTTTATGCAAAACTTCTTTATACATCTATTCTCCTCCCCCGCTTTTCTCGTACTGGTGTGAAGCTTCAACAGTTGAGAAGGTGGTTTTAAGCGTTGCGAGGTAA 696 0.4856 MTTTTTTSTTLGRDESIDYDSSSLVSLCSSATDTSHYAKPYKANIQLLCRHKGTLGLHHFRLLRRLVGGDIENVYLCQIRNPMVGLPQCFYTMQVVDREALAIRKKLQRVEMEKEILSMIDHPFLPTLYAELDAPHYSCFVMEFCPGGDLYAARQRQPGKRFSITSTRFYAAETLVALEYLHMMGIIYRDLKPENVLTLCKTSLYIYSPPPLFSYWCEASTVEKVVLSVAR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03015 231 SUPERFAMILY Protein kinase-like (PK-like) 40 198 IPR011009 -
Rops11g03015 231 SMART serkin_6 60 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03015 231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Rops11g03015 231 Gene3D Transferase(Phosphotransferase) domain 1 145 198 - -
Rops11g03015 231 PANTHER FLIPPASE KINASE 1-RELATED 16 197 - -
Rops11g03015 231 ProSiteProfiles Protein kinase domain profile. 60 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g03015 231 Gene3D Phosphorylase Kinase; domain 1 58 144 - -
Rops11g03015 231 Pfam Protein kinase domain 103 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03015 Rops-Chr11 53203260 53203955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03015 22 197 AGC Kinase Gene Family AT2G26700 61.413 1.18e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops11g03015 Pkinase 3.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03015 K08286 - gmx:100775924 271.937