Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03001 ATGGGGTATTTTTTTTGGGTGCAGGTTTTCAGTCGTGTTTGCAAGCCTAGAACACTTGATCCTACCAAAGTAAAGGGAAAAATACTGATCTGCATTCGACGTGATAGAACTACATCTGTTGCTCAGGGCTATGAAGCTGCTCTTGCTGGTGCAGTAGGAGTGTTTGTGATCAATGACGAACAAAGTGGAGATATACTTCTAGCTGAGCCTTATCCTTTACCTGCTTATTCACTAGCCACAAGTCCATCCAATCTACCTTCAGATACACGTCGTGTTCCTTTCAATGTGCAACAGGGAACTTCTATGTCTTGCCCTCATGTTGTTGGCATTGCAGGTCTCCTCAAGACACTTCATCCTGATTGGAGTCCAGCAGCTATCAAATCAGCCATTATGACTACTGGTATGATGCCAAAATAA 417 0.4341 MGYFFWVQVFSRVCKPRTLDPTKVKGKILICIRRDRTTSVAQGYEAALAGAVGVFVINDEQSGDILLAEPYPLPAYSLATSPSNLPSDTRRVPFNVQQGTSMSCPHVVGIAGLLKTLHPDWSPAAIKSAIMTTGMMPK* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03001 138 SUPERFAMILY Subtilisin-like 83 135 IPR036852 GO:0004252|GO:0006508
Rops11g03001 138 ProSitePatterns Serine proteases, subtilase family, serine active site. 99 109 IPR023828 -
Rops11g03001 138 Pfam Subtilase family 87 133 IPR000209 GO:0006508|GO:0008236
Rops11g03001 138 SUPERFAMILY PA domain 21 79 IPR046450 -
Rops11g03001 138 CDD PA_subtilisin_like 5 75 - -
Rops11g03001 138 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 80 133 IPR045051 -
Rops11g03001 138 Gene3D Peptidase S8/S53 domain 83 134 IPR036852 GO:0004252|GO:0006508
Rops11g03001 138 ProSiteProfiles Serine proteases, subtilase domain profile. 1 138 - -
Rops11g03001 138 Pfam PA domain 22 86 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03001 Rops-Chr11 52858910 52859698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03001 13 75 Subtilisin-like Serine Gene Family AT5G59810 47.619 7.44e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03001 - - vum:124826760 112.079