Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02992 ATGCAGCAAGATCACAGGAAAAAGAGTTCAACAGAGATGGATTTTTTCTCTGAATATGGCGATGCCAACCGGTACAAAAATCAAGAAGTCATTGGGAAAGGAAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCATACTGGTGAAAAAGTGGCAATTAAGAAGATTCATGACATCTTCGAGCATATATCTGATGCTGCCCGTATTCTACGTGAGATAAAGCTGCTTAGACTTCTACGACATCCTGATATTGTTGAAATAAAACACATTATACTGCCTCCTTCCAGGAAGGACTTCAAAGATATTTACGTAGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATTAAAGCTAATGATGACTTAACAAAAGAGCACTATCAGTTTTTTCTTTATCAATTACTTCGAGCGCTGAAGTTTATTCACACTGCAAATGTCTATCATCGAGATTTGAAGCCAAAGAATATACTGGCAAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTTAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGTTGTGTGGATCATTTTACTCGAAGTATACACCAGCGATTGATATATGGAGTATAGGTTGCATCTTTGCTGAAGTACTAACAGGAAAGCCACTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACGGATCTGCTTGGGACTCCCTCACTGGATACTATATCACGGGTTCGCAATGAGAAGGCTAGGAGATACCTAACTAGCATGAGGAAAAAGCAGCCTGTGCCGTTTGCACAAAAATTTCCCAATGCAGACCCTTTAGCACTACGACTACTGGAAAGATTGCTTGCTTTTGATCCAAAAGACCGGCCCACTGCCGAAGAGGCATTGGCTGATCCTTACTTCAAGGGACTGGCAAAAGTTGAGAGGGAACCGTCCTGCCAGCCTATCACGAAAATGGAGTTTGAATTTGAAAGACGAAGAGTCACAAAGGAAGAAATTCGAGAGCTAATTTTCCGTGAGATTCTAGAGTATCATCCTCAACTATTAAAAGACTACATGAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAATGGTCCTGTTATGCCACTTGATAGAAAGCATGTTTCTCTTCCAAGGTCAACAATTGTACATTCGAATACGGTACACCAAAAAGAGCAAACAAATATTGCTTCCAGCAAGAACCGGCAAACAGCCGAGGAACATAATAAGAACACCAGAGATACAGAAAATCCAGTGCCAAGGTCGATGCAGGGACCACAAAGAATTCCTCTAGCAAAACCTGGTAAAGTTGTCGGGCCTGTTGTTCCATACGAGTATGGGGGTGTTGTTAAGGATTCTTGTGATCCAAGGACATTTATCAGAGGTTCTGTGCTTCCTTCTCAACCTGTCCCCCCAGCATATTATTATCAAAGAGCTGGAAATCAAGAAAGGGCAGCAACAGAAGCTGATAAGGGTCTGCCTTTGCAAACAAAACATGCACAGCAGTGTGGAGTAAATGCCAAAATAGCACCAGATATAGCTATTAATATTGATACAAATCCCTTTTTTATGACACGGGCAGGAGTGAACAAGTTAGAACAGGATGATCAAATAGCCATAGAAACAAACTTGTTGCAGTCAAAGCCTCAATACGGTGGAATTAGTGCAGCAGCTGGGGCCACTGCTCATAGAAAGGTTGGGCCTATTCAGTATGGTATGGCAAGGATGTTCTAG 1836 0.4112 MQQDHRKKSSTEMDFFSEYGDANRYKNQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIILPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKFIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKNGPVMPLDRKHVSLPRSTIVHSNTVHQKEQTNIASSKNRQTAEEHNKNTRDTENPVPRSMQGPQRIPLAKPGKVVGPVVPYEYGGVVKDSCDPRTFIRGSVLPSQPVPPAYYYQRAGNQERAATEADKGLPLQTKHAQQCGVNAKIAPDIAINIDTNPFFMTRAGVNKLEQDDQIAIETNLLQSKPQYGGISAAAGATAHRKVGPIQYGMARMF* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02992 611 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02992 611 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Rops11g02992 611 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 388 - -
Rops11g02992 611 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Rops11g02992 611 MobiDBLite consensus disorder prediction 420 468 - -
Rops11g02992 611 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Rops11g02992 611 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02992 611 MobiDBLite consensus disorder prediction 420 436 - -
Rops11g02992 611 CDD STKc_TDY_MAPK 24 361 - -
Rops11g02992 611 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Rops11g02992 611 FunFam Mitogen-activated protein kinase 15 118 - -
Rops11g02992 611 FunFam Mitogen-activated protein kinase 111 339 - -
Rops11g02992 611 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02992 611 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02992 Rops-Chr11 52625272 52632208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02992 1 435 MAP Kinase Gene Family AT2G42880 88.532 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Rops11g02992 Pkinase 3.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02992 - - gmx:100811788 1127.85