Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02983 ATGGCTGAAATTATCATCTCCATTGTGGCCAAAGTCGCTGAATATTTGGTGAAACCTGCAATACGCGAAGGACAATACTTTCTTTGTGTTAACAAAGTTATCAAAGATGTTGAGAATGAAAAGGAGAAGCTGACATCTGAAAGAGATCACATGCAGGGTGAAGTTAAAAAAGCCAAGCAGAGAGCTGAAGTAATTGAGGAACCTGTGGAAAAGTGGCTGAATGGTGTGGAAAATCTACTGAAAGAGGTGACAGATCTGGAACAAAGGATGGCAGTACACAACAATTGCTTTCCAGGATGGTGTCCGACTTGGAAACGATATCGTTTATGCAAGCAAATGGAAAAGAAGAAAAAAGCAATGGAGAACCTCAAAGCCACAAGCAATATTCAGCGAATTTCTCGGCGTCCTCCACTTCCAGGCATTCAATATCAGTCATCCAAAAATTTTACTTATTTTGAATCAACAAAAGTGGCCTACAAGCAACTCCTGGAGGCACTGCATGATGAACAGGTCTATATGATAGGAGTGTATGGGATGGGTGGATCAGGGAAAACAACTCTTGTAACAGAAGCCGGTAAGAAGGTTGAGTCGGAGTTGTTTGAAAAGGTTATAAAAATTACAGTATCTCAAACTGCAAACATTAATGACCTTCAAGGTGAGATGGCAGATATGTTGGAGATGGAACTAAAGGAAGTATCTGAGGAGGCAAGGGCTCAACGTTTATGGTTGAGTTTGAAAGAAAATAAGCGAATTCTTGTGATTGTAGATGATTTATGGACAAAGTTTGAATTGAAGGATATAGGCATTCGCTTAGACGATAATGACATGGGGAAATGGAAGTGTGCAAACATTGATGATGATTTTTCCAAGTCATTGGATGATAGACCACGGAAAGTTTGCTATGAGTGCAAAGAATTACCCATAGCAATTGCAACCGTGGGATCTTCATTGAAAGGAAAATCTAATGCTGCTGACTGGGAGGTGGCATTATGCAGCTTGAGTCAACCGGAGGCTATTCATGATGATCATGTAGACGAAGCAGTTAAAAATGTTTTCACTTGTCTTAAATTCAGCTATGATTATTTAGAAAACAAAGAAGCAAAGTTACTCTTCTTGATATGTTCTATGTTTCCGGAAGACTACAACATCTCAACAGAAGATTTGATCCGCTATGCAGTTGGAGTGGGCCAGCGAGGAAAAATTTCGTTAGAATCAGCAAGGTACTTTATTGAAGCAAACATAAACAAACTCTTACGATCTTGTTTGTTGATGCATGCTGATAAAGGCAAACACTATGTGAAGATGCATGACTTGGTTCGTGACACAGCCCTATGGATAGGAAAGAGATCAGAGAATTGTAAATTTTTATTTAGTCTTGACAAACCACTCAGGGACTTGGCTGAAGATGATACTATAGGAGACTGTTTTGCGATATCCTCATGGTACAATGAAAATCAAATTTGCAAGGATGATGCTCAATTGAAAGCTCCAAACCTTGAAATTCTATTGCTAAATATGAAGATTTCGCGGGGTTCCTTGGATTTATCAGATGCAACCTTTGAAGAGATGAAAGGGCTCAAGGTTTTTGCTATAATCAATAATCATTATGAATATCCATCATTATCATTGCCTCAATCAACCCAGTTGTTAACAAATCTTCGAACTCTGCGATTGAACCATTGGGAGTTAGGTGACATTTCTTTCATAACAAGTTTAACAAGAATCGAGGTTCTTGACTTGCGAAAGTGTAGCTTCAATGAACTTCCTAATGAAATTGGAAAACTCAAAGGATTGAAGCTGTTAGATTTGTCAAATTGTCATATTAAAGAAAACTATAATGGAGCAATAGGAAAATGTTCACGACTAGAAGAGTTATATTTCTCAGGAACAAGTAAGTACCACCACCAGAGCATCATGGATGTAGTTACTCTCCCAATTCGTTTATAA 1947 0.3837 MAEIIISIVAKVAEYLVKPAIREGQYFLCVNKVIKDVENEKEKLTSERDHMQGEVKKAKQRAEVIEEPVEKWLNGVENLLKEVTDLEQRMAVHNNCFPGWCPTWKRYRLCKQMEKKKKAMENLKATSNIQRISRRPPLPGIQYQSSKNFTYFESTKVAYKQLLEALHDEQVYMIGVYGMGGSGKTTLVTEAGKKVESELFEKVIKITVSQTANINDLQGEMADMLEMELKEVSEEARAQRLWLSLKENKRILVIVDDLWTKFELKDIGIRLDDNDMGKWKCANIDDDFSKSLDDRPRKVCYECKELPIAIATVGSSLKGKSNAADWEVALCSLSQPEAIHDDHVDEAVKNVFTCLKFSYDYLENKEAKLLFLICSMFPEDYNISTEDLIRYAVGVGQRGKISLESARYFIEANINKLLRSCLLMHADKGKHYVKMHDLVRDTALWIGKRSENCKFLFSLDKPLRDLAEDDTIGDCFAISSWYNENQICKDDAQLKAPNLEILLLNMKISRGSLDLSDATFEEMKGLKVFAIINNHYEYPSLSLPQSTQLLTNLRTLRLNHWELGDISFITSLTRIEVLDLRKCSFNELPNEIGKLKGLKLLDLSNCHIKENYNGAIGKCSRLEELYFSGTSKYHHQSIMDVVTLPIRL* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02983 648 Coils Coil 34 61 - -
Rops11g02983 648 Gene3D - 359 444 IPR036388 -
Rops11g02983 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 374 IPR027417 -
Rops11g02983 648 SUPERFAMILY L domain-like 434 631 - -
Rops11g02983 648 Gene3D - 281 358 IPR042197 -
Rops11g02983 648 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 632 - -
Rops11g02983 648 Pfam NB-ARC domain 160 276 IPR002182 GO:0043531
Rops11g02983 648 Coils Coil 69 96 - -
Rops11g02983 648 Gene3D - 141 280 IPR027417 -
Rops11g02983 648 Gene3D Ribonuclease Inhibitor 476 641 IPR032675 -
Rops11g02983 648 PRINTS Disease resistance protein signature 245 259 - -
Rops11g02983 648 PRINTS Disease resistance protein signature 593 609 - -
Rops11g02983 648 PRINTS Disease resistance protein signature 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02983 Rops-Chr11 52477553 52479603 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02983 174 606 WRKY Transcription Factor Family AT5G45050 24.571 3.54e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02983 - - cam:101506740 722.235