Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02965 ATGTGCTGTGTGTTGGAGAGGTTAAAGCCAACACCATCTCCAACTCTATCTCTTGTTTTGTTAAGCACATCTCAACCCAGAAGCCACATGATGAACCACTTGACCGTTGAGACTGAAGATTCTTTTGCTAGCTTGCTCGAGTTGGCAGCCAATGATGATGTTGAAGGTTTCAAACTAATGATTGAACGAGATCCTTCTTGTGTAGATGAGGAAGGGCTTTGGTATAGTCGCAAGAAGGGCTCAAAGCAGATGGTCAATGAGTGCAGGACGCCTTTGATGGTAGCTGCTACTTATGGAAGCATTGATGTTATGAAACTGATTCTTTCACTATCTGATTATGATATTAGTAAACCCTGTGGCCTTGACAAGAGCATTGCCCTTCATTGTGCTACCTCAGGTGGAGTTGTAAATGCTGTTGATGTTGTTAAACTTCTTCTAGAAGTAGGTCTTGAAGAACTTTTTCAAACTGATGACTCCATTACAGGGTGTAATCTTAGGGTGATCACAACCCCATCAAACACATATTATCCACCTTTATCAGCTTCAAGGTTAGACCTTGTTCACGTGCTTATTCTCATGATTGGACTAAGTGCCCTTTTGTTCATCCAGGGGAGAATGCTCGACGAAGGGACCCTAGAAAGTACCAATACAGTTGTGTCACGTGTCCTGAATTCTGAAAGGGTGCTTGCCGACGTGGTGATATGTGTGACTATGCTCAAGGGGTTTTTTTTCCGAGTGCTGGCTGCATCCTGCACAATATCGAACTTGTCTATGCAAGGGTGGGACAAATTGCTCCCAATTGGGAACTCGTCTATGTCTGACATATCTCCTTCACCATTCACTCCACCCATGTCACCCTCTGCCGATGGCACTTCACATTCTTCTGTTGCTTGGACCCAGCCGAACATCCCAGCTTTGCATCTTCCAGGAAGTAATCTTCACTCTAGTCGATTTAGATCTTCACTCAATGCTAGAGATATTCCTGCATATGGTTTTGACGTGTTATCTGATTATGATCAACAGCAACAGCTCCTTAACGAGCTATCATGCTTTTCTCCACAGCCTATGAATTCTAATACTCTAAACTGCTCTGGTCGTATGAAACTCTTGACTCCGTCAAATCTTGATGATCTCTTTTCTGCTAAGAGTTCTTTTCCACGATATGACTAA 1170 0.4325 MCCVLERLKPTPSPTLSLVLLSTSQPRSHMMNHLTVETEDSFASLLELAANDDVEGFKLMIERDPSCVDEEGLWYSRKKGSKQMVNECRTPLMVAATYGSIDVMKLILSLSDYDISKPCGLDKSIALHCATSGGVVNAVDVVKLLLEVGLEELFQTDDSITGCNLRVITTPSNTYYPPLSASRLDLVHVLILMIGLSALLFIQGRMLDEGTLESTNTVVSRVLNSERVLADVVICVTMLKGFFFRVLAASCTISNLSMQGWDKLLPIGNSSMSDISPSPFTPPMSPSADGTSHSSVAWTQPNIPALHLPGSNLHSSRFRSSLNARDIPAYGFDVLSDYDQQQQLLNELSCFSPQPMNSNTLNCSGRMKLLTPSNLDDLFSAKSSFPRYD* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02965 389 PANTHER UNKEMPT FAMILY MEMBER 47 151 IPR045234 -
Rops11g02965 389 Gene3D - 35 158 IPR036770 -
Rops11g02965 389 SUPERFAMILY Ankyrin repeat 44 153 IPR036770 -
Rops11g02965 389 SMART ANK_2a 87 117 IPR002110 GO:0005515
Rops11g02965 389 SMART ANK_2a 122 155 IPR002110 GO:0005515
Rops11g02965 389 SMART ANK_2a 40 69 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02965 Rops-Chr11 52124920 52126175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02965 280 388 C2H2 Transcription Factor Family AT5G12850 51.818 8.64e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02965 - - ccaj:109796653 246.899