Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02945 ATGGTAACCATTACGGCTTCTTACACTGTGATTCCAAATCAATCAACTCCACAGGGTCGTTCATGGCTGTCCGATATGGACCAAGTTGTTCGTCTACACCACTTACCAACTATCTACATTTACAAAGCAAAACACAACCAAGATTGTATAGAGAGGATGAGGAGCTCTCTTAGCAACATTTTAGTTCACTATTATCCCATGGCTGACAGATTATGCTGGACAGAAGGTGGTCGACTAGAACTGGATTGTAATGCAAAGGGAGCTCTATTGCTTGAAGCTGAAACCACAAAAACATTGGTTGATTATGGTGATTTCTCACCATCTGAGTCCACCAAGGAACTTGTTCCAACAATTGATTACACTCAACCAATGGAAGAGCTTCCTTTGTTTGTGGTGCAGCTTACAAGATTCCATGGTGACAATGAAGGCCTTGCCATTGGTGTTGCTTTCTTCCACCCTTTGGCTGATGGGTTTAGTGCCATTCACTTCATCAACTCATGGGCAAAGATAGCTCGAGGAGATACACTACAACCCGATGAAATGCCATTTCTTGATCGAACAATACTCAAATTTTCACACCCCCCATTGGCTCCACGCTTTGAACACATAGAGTTGAAACCTCTTCCACTAATTCTAGGAAGATCTGACGCCATTGAAGAGAGAAATAAGAAGACAACAGCTGAATTGTTAAGACTCAGTGCAGAACAAGTTGAGAAGCTGAAGAAAAAGGCCAATGATCAAGCACCTAAACAAGGGTCAAGACCTTATAGCAAATTTGAAGCAATTAGTGCACATATTTGGAGATGTGCATCTAAGGCTCGTGAGCTTGATGAGAATCAACCAACTGTGGTTCGTTTCAATGCTGATATTCGCAGTAGACTGATTCCTCCTCTTCTTCGGAATTATTTAGGGAATGCTTTGGCACAAACAGCAGCAACAGGTTATGTTGGAGAAATCACATCAAAACCATTGAGTTATGTTGCACATAAGTTAAGGGAAGCAATTGAGCTGGTGACTGATGAGTACATAAGGTTACAGATAGATGTTATTAGAAGTCATGAGAATTTGGATAGTGCAAGGCCTTTATTCATAGGAAGAGAAGGTAAGAGTGCCCCCTATTTTGGGAATCCTAATTTCCATCTCACAAGCTGGATGAGCATGCCAGTGTATGAAGCAGATTTTGGGTGGGGAAAGCCTGTGTATTTTGGTATAGCACATGTCTCTCCGCATGACAGGGCATTACTTCTTCTTAGCCCAGATGGGAATGGCTCAGTCATTGTGTGCTTGTACTTCCAGATAGCACATTTGCAGCTTTTCAAGAAGTTCTTCTATGAGGACATGTGA 1344 0.4204 MVTITASYTVIPNQSTPQGRSWLSDMDQVVRLHHLPTIYIYKAKHNQDCIERMRSSLSNILVHYYPMADRLCWTEGGRLELDCNAKGALLLEAETTKTLVDYGDFSPSESTKELVPTIDYTQPMEELPLFVVQLTRFHGDNEGLAIGVAFFHPLADGFSAIHFINSWAKIARGDTLQPDEMPFLDRTILKFSHPPLAPRFEHIELKPLPLILGRSDAIEERNKKTTAELLRLSAEQVEKLKKKANDQAPKQGSRPYSKFEAISAHIWRCASKARELDENQPTVVRFNADIRSRLIPPLLRNYLGNALAQTAATGYVGEITSKPLSYVAHKLREAIELVTDEYIRLQIDVIRSHENLDSARPLFIGREGKSAPYFGNPNFHLTSWMSMPVYEADFGWGKPVYFGIAHVSPHDRALLLLSPDGNGSVIVCLYFQIAHLQLFKKFFYEDM* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02945 447 Gene3D - 214 446 IPR023213 -
Rops11g02945 447 Coils Coil 215 247 - -
Rops11g02945 447 Gene3D - 1 207 IPR023213 -
Rops11g02945 447 Pfam Transferase family 1 445 - -
Rops11g02945 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02945 Rops-Chr11 51629927 51631270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02945 2 445 Monolignol Biosynthesis Gene Families AT5G48930 34.004 1.89e-92 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02945 K13065 - gmx:100779814 613.224