Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02944 ATGGTAACCATTACAGCTTCTTACACTGTGATTCCAAATGAATCAACTCCACAGGGTCGTTCATGGCTGTCCGATATGGACCAAGTCGTGCATCTACACCTCATACCAACTATCTACATTTACAAAGCAAAACACAACCAAGATTGCATAGAGAGGATGAGGAACTCTCTTAGCAGCATTTTAGTTCACTATTATCCCATGGCTGGCAGATTATGCTGGACAAAAGAAGGTGGTCGACTAGAATTGGATTGTAATGCAAAGGGAGCTCTATTGTTTGAAGCTGAAACCACAAAAACAATGGTTGATTATGGTGATTTCTCACCATCTGAGTCCACCAAGGAACTTGTTCCAACAATTGATTACACTCAACCAATGGAAGAGATCCCATTGTTAGTGGTGCAGCTTACAAGATTCCATGGCAATGAAGGGATTGCCATTGGAGTTGCTTTATCTCACCCTTTGGCTGATGGGTTTAGTGCCATTCACTTCATCAACTCATGGGCAAAGATAGCTCGAGGAGATACACTACAACCCGATGAAATGCCATTTCTTGATCGAACAATACTCAAATTTTCACACCCTCCATTGGCTCCACGCTTTGAACACATAGAGTTGAAGCCTTTGCCACTCATTATAGGAAGAACTGACACTATTGAAGAGAAAAATAAGAAGATAACTGCTGAATTGTTAAGACTCACGCCAGAGCAAGTTGAGAAGCTGAAGAAGAAAGCCAATGATGAAGCCCCCCAAAAAGGGTCAAGACCTTATAGCAAATATGAAGCTATTGGGGCACATACATGGAGATGTGCATCTAAGGCTCGTGAGCTTGATGAGAATCAACCAACTGTGGTTCGTTTCAATGCTGATATTCGAAGTAGACTGATTCCTCCTCTTCCTCGGTATTATTTTGGGAATGCTTTGGCACAAACAGCAGCAAGTGGTTATGATGGAGAAATCACATCAAAACCATTGAGTTATGCTGCACATAAGTTAAGGGAAGCAATTGAGCTGGTGAATGATGAGTACATAAGGTCACAGATAGATGTTATTAGAAGTCATGAGCATTTGGATAGTGCAAGGGCTTTATTCTTAGGAGGAGAAGGTAAGAATTCTCCGTATTTTGGGAATCCTAATTTCCATCTCACAAGCTGGATGAGCATGCCAGTGTATGAAGCAGATTTTGGGTGGGGAAAGCCTGTGTATTTTGGTATAGCACATGTCTCTCCGCATGACAGGGCATTACTTCTTCTTAGCCCAGATGGGAATGGCTCTGTCATTGTGTGCTTGTACTTCCAGATAGCACATTTGCAGCTTTTCAAGAAGTTCTTCTATGGGGATATTTGA 1344 0.4196 MVTITASYTVIPNESTPQGRSWLSDMDQVVHLHLIPTIYIYKAKHNQDCIERMRNSLSSILVHYYPMAGRLCWTKEGGRLELDCNAKGALLFEAETTKTMVDYGDFSPSESTKELVPTIDYTQPMEEIPLLVVQLTRFHGNEGIAIGVALSHPLADGFSAIHFINSWAKIARGDTLQPDEMPFLDRTILKFSHPPLAPRFEHIELKPLPLIIGRTDTIEEKNKKITAELLRLTPEQVEKLKKKANDEAPQKGSRPYSKYEAIGAHTWRCASKARELDENQPTVVRFNADIRSRLIPPLPRYYFGNALAQTAASGYDGEITSKPLSYAAHKLREAIELVNDEYIRSQIDVIRSHEHLDSARALFLGGEGKNSPYFGNPNFHLTSWMSMPVYEADFGWGKPVYFGIAHVSPHDRALLLLSPDGNGSVIVCLYFQIAHLQLFKKFFYGDI* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02944 447 Pfam Transferase family 1 443 - -
Rops11g02944 447 Gene3D - 213 445 IPR023213 -
Rops11g02944 447 Gene3D - 1 207 IPR023213 -
Rops11g02944 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02944 Rops-Chr11 51598894 51600237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02944 2 444 Monolignol Biosynthesis Gene Families AT5G48930 35.650 7.87e-94 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02944 K13065 - gmx:100778626 620.928