Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02939 ATGGTAACCATTACAGCTTCTTACACTGTGACTCCAAATGAATCAACCCCACAGGGTCGTTTATGGCTGTCCGATATGGACCAAGTTGTGCGTTTACGCCACACTCCCACTCTCTACATTTACAAAGCAAAATACCACCATGATTGTATAGAGAGGATGTGGAACTCTCTTAGCAAGATTTTAGTGCACTACTATCCCATGGCTGGCAGATTATGCTGGACAGAAGAAGGTGGTAGAATAGAATTGAATTGTAATGCAAAGGGAGCTTTATTGCTTGAAGCTGAAACCACAAAAAGAATGGTTGATTATGGTGACTTCTCACCCTCTGAGTCAACCAAGGAACTTGTTCCAACATTTGATTACACTCAACCAATGGAAGAGCTTCCTTTGTTTGTGGTACAGCTTACAAGATTCCGTGGCAATGATGGCCTTGCCATTGGTGTTGCTTTCTTCCACTCTTTGGCTGAAGGGCTTGGTTTCATTCATTTCATCAACTCATGGGCAAAGATAGCTCGAGGAGATACAATACAACCTGATGAAATGCCATTTCTAGATCGAACAATACTCAAATTTTCACACCCCCCATTGGCTCCACGCTTTGACCACATAGAGTTGAAGCCTCTTCCACTCATTCTTGGTAGATCTGACACCATTGAAGATAGTAATCAGAAGACAACTGCTGAATTGTTAAGACTCACTGCAGAACAAGTTGAGAAGCTGAAGCAAAAGGCCAATGATCAAGCTCCTAAACAAGGGTCAAGACCTTATAGCAAATATGAAGCAATTAGTGCACATATTTGGAGATGTGCGTGTAAAGCTCGTGAGCTTGATGAGAATCAACCAACTGTTGTTCTGTTCAATGCTGATATTCGCAATAGGTTGATTCCATCTCTTCCTCGGAATTATTTTGGGAATGCTTTGGCACAAACAGCAACAACAGGTTATGTTGGAGAAATCACATCAAAACCATTGAGTTATGTTGCACAGAAGTTAAGGGAAGCAATTGGGTTGGTGACAGATAGATGTTATTAG 1032 0.4157 MVTITASYTVTPNESTPQGRLWLSDMDQVVRLRHTPTLYIYKAKYHHDCIERMWNSLSKILVHYYPMAGRLCWTEEGGRIELNCNAKGALLLEAETTKRMVDYGDFSPSESTKELVPTFDYTQPMEELPLFVVQLTRFRGNDGLAIGVAFFHSLAEGLGFIHFINSWAKIARGDTIQPDEMPFLDRTILKFSHPPLAPRFDHIELKPLPLILGRSDTIEDSNQKTTAELLRLTAEQVEKLKQKANDQAPKQGSRPYSKYEAISAHIWRCACKARELDENQPTVVLFNADIRNRLIPSLPRNYFGNALAQTATTGYVGEITSKPLSYVAQKLREAIGLVTDRCY* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02939 343 Pfam Transferase family 1 339 - -
Rops11g02939 343 Gene3D - 1 207 IPR023213 -
Rops11g02939 343 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 340 - -
Rops11g02939 343 Gene3D - 213 343 IPR023213 -
Rops11g02939 343 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02939 Rops-Chr11 51502818 51504392 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02939 2 333 Monolignol Biosynthesis Gene Families AT5G48930 36.418 4.08e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02939 K13065 - gmx:100778626 466.077