Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02936 ATGGTAACCATTACCGCTTCTTACACTGTGATTCCAAATGAATCAACTCCACAAGGTCGTTTATGGTTGTCCGATATGGACCAAGTTGTGCGTCTTCGCCACACTCCCACTATCTACATTTACAAAGCAAAACACCACCATGATCACATAGAGAGGATGAGGAAGTCTCTTAGCAAGATTCTAGTGCACTACTATCCAATGGCTAGCAGATTATGCCGGACAGAAGAAGGTGGTAGAATAGAATTGGATTGTAATGCAAAGGGAGCTCTATTGCTTGAAGCTGAAACCACCAAAACATTGGTTGATTATGCTGATTTCTCACCCTGTGAGTCCACCAAGGAACTTGTTCCAACGGTTGATTACACTCAACCAATGGAAGAGCTTCCTTTGTTTGTGGTGCAGATTACAAGATTCCATGGCAACAATGAAGGCCTTGCCATTGGTGTTGCTTTCTTCCACCCTTTGGTTGATGGGCTTGGTGCCACTCGTTTCATCAAATCTTGGGCAAAGGTAGCTCGAGGAGAGACACTACAACCTGATGAAATGCCATTTCTAGATTGA 561 0.4385 MVTITASYTVIPNESTPQGRLWLSDMDQVVRLRHTPTIYIYKAKHHHDHIERMRKSLSKILVHYYPMASRLCRTEEGGRIELDCNAKGALLLEAETTKTLVDYADFSPCESTKELVPTVDYTQPMEELPLFVVQITRFHGNNEGLAIGVAFFHPLVDGLGATRFIKSWAKVARGETLQPDEMPFLD* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02936 186 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 185 - -
Rops11g02936 186 Gene3D - 1 186 IPR023213 -
Rops11g02936 186 Pfam Transferase family 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02936 Rops-Chr11 51485984 51486544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02936 2 186 Monolignol Biosynthesis Gene Families AT5G48930 37.433 3.48e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02936 K13065 - gmx:100778626 257.684