Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02933 ATGTGTACGGGAAGCTACAGTAGTGAGGTTAGCCATGATGGGAAACACATGGAGAATATTGAATTAGACGATTCTGATTCCCATACTGATATGGAGTGGGAGGAGGAACAATTTTGTGCAGTTGAACAAGAAGAAGACATGGATTCTTCCGTCATCATGCAGGAGGAGACTGACTCAGAATTTGAGGAAATGAGAAAGATAAACCCACGAAAGCCAAATTTTCTGCCCTTGGTTCCTGACCCAGAACCAGAAAAGGTTGACCTGAAGCATAAAACGATGGATGAAAGGAAAAATGCAGAGGAATGGATGCTTGATTTTGCACTCAGACAAGCTGTCACAAAACTTGCTCCAGCTGGGAAAAGGAAGGTGTCATTGCTTGTTAAAGCTTTTGAATCAGTAATTTCAGTACCCAAATGCGAAACCCGTATGAGAAACTTAGACCAACTCAATATGAAATGCAAATATATGCATATGCTTCACTCATTACATGATCAAACAAAATAA 504 0.4028 MCTGSYSSEVSHDGKHMENIELDDSDSHTDMEWEEEQFCAVEQEEDMDSSVIMQEETDSEFEEMRKINPRKPNFLPLVPDPEPEKVDLKHKTMDERKNAEEWMLDFALRQAVTKLAPAGKRKVSLLVKAFESVISVPKCETRMRNLDQLNMKCKYMHMLHSLHDQTK* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02933 167 SMART CaM_binding_2 29 135 IPR012417 GO:0005516
Rops11g02933 167 MobiDBLite consensus disorder prediction 1 30 - -
Rops11g02933 167 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 51 135 IPR044681 GO:0005516
Rops11g02933 167 Pfam Plant calmodulin-binding domain 53 135 IPR012417 GO:0005516
Rops11g02933 167 MobiDBLite consensus disorder prediction 11 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02933 Rops-Chr11 51461082 51461585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02933 59 133 Calmodulin-binding Proteins AT2G38800 62.667 2.24e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02933 - - gmx:102670203 149.443