Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02932 ATGATAACCATTAAGGCTTCTTACACTGTGATTCCAAATGAATCAACCCCACAGGGTCGTTTATGGCTGTCCGATATGGACCAAGTTGTGCGTCTACGCCACACTCCCACTCTCTACATTTACAAAACAAAACACCACCACGATCACATAGAGAGGATGAGGAACTCTCTTAGCAAGATTTTAGTGCATTACTATCCAATGGCTGGCAGATTATGCTGGACAGAAGAAGGTGGTAGAATAGAATTGGATTGTAATGCAAAGGGAGCTCTATTGCTTGAAGCTGAAACCACAAAAACATTGGTTGATTATGCTGATTTCTCACCATCTGAGTCCACCAAGGAACTTGTTCCAACAATTGATTACACTCAACCAATGGAAGAGCTTCCTTTGTTTGTGGTGCAGATTACAAGATTCCATGGTGACAATGAAGGCCTTGCCATCGGTGTTGCTTTCTTCCACCCTTTGGCTGATGGGCTTGGTGCCACTCGTTTCATCAAATCATGGGCAAAGATAGCTCGAGGAGAGACACTACAACCAGATGAAATGCCATTTCTAGATCGAACAATACTCAAATTTTCACACCCCCCATTGGCACCACGCTTTGACCACACAGAATTGAAGCCTCTTCCACTCATTCTTGGAAGATCTGACACCATTGAAGAGAGAAATAAAATGACAACAGCTGAATTGTTGAGACTGACGGCAGAACAAGTTGAGAAGCTGAAGAAAAAGGCCAATGATCAAGTCCCTAAAGAAGGGTCAAGACCTTACAGCAAATATGAAGCAATCAGTGCACATATATGGAGATGTGCATCTAAGGCTCGTGAGCTTGAAGATAATCAACCAACTGTGGTTCGTTTCAATGTTGATGTTCGCAGTAGGTTGATTCCACCTCTTCCTTGGAATTATTTTGGGAATGCTTTGGCACAAACAGCAGCAAGTGGTTATGTTGGAGAAATCACATCAAAACCATTGAGTTATGTTGCACAGAAGTTAAGGGAAGCAATTGAGTTGATGACTGATGATTACATAAGGTCACAGATTGATGTTATTAGAGGTCAGGAGCATTTGGATGATGCCAGGGCTTTATTCTTAGGTGGAGAAGGTAAAAATGTCCCATATTTTGGGAACCCTAATTTTCATCTCACAAGTTGGATGAGCATGCCAGTTTATGAAGCAGATTTTGGGTGGGGAAAGCCTGTGTATTTTGGTATAGCATATGTCTCTCCACATGACAGGGCAGTAATTCTTTTTAGCCCAGATGGGAATGGCTCTGTCATTGTGTGCTTGCACTTCCAGATAGCACATTTCCAGCTTTTCAAGAAGTTCTTCTATGGGGATATATGA 1347 0.4224 MITIKASYTVIPNESTPQGRLWLSDMDQVVRLRHTPTLYIYKTKHHHDHIERMRNSLSKILVHYYPMAGRLCWTEEGGRIELDCNAKGALLLEAETTKTLVDYADFSPSESTKELVPTIDYTQPMEELPLFVVQITRFHGDNEGLAIGVAFFHPLADGLGATRFIKSWAKIARGETLQPDEMPFLDRTILKFSHPPLAPRFDHTELKPLPLILGRSDTIEERNKMTTAELLRLTAEQVEKLKKKANDQVPKEGSRPYSKYEAISAHIWRCASKARELEDNQPTVVRFNVDVRSRLIPPLPWNYFGNALAQTAASGYVGEITSKPLSYVAQKLREAIELMTDDYIRSQIDVIRGQEHLDDARALFLGGEGKNVPYFGNPNFHLTSWMSMPVYEADFGWGKPVYFGIAYVSPHDRAVILFSPDGNGSVIVCLHFQIAHFQLFKKFFYGDI* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02932 448 Pfam Transferase family 1 444 - -
Rops11g02932 448 Gene3D - 215 446 IPR023213 -
Rops11g02932 448 Gene3D - 1 208 IPR023213 -
Rops11g02932 448 Coils Coil 228 248 - -
Rops11g02932 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02932 Rops-Chr11 51435203 51436750 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02932 2 445 Monolignol Biosynthesis Gene Families AT5G48930 35.874 1.45e-93 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02932 K13065 - gmx:100778626 625.935