Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02923 ATGATTTCGTCTTTGAGACAACCTGGTATAGTAGGGATCAATGGTTCTGATGTTGTTTTGAGGAAAAGACATGCAACCCCGGTGAAGAATTTTGGGTTGTTTTTACCTTCTCTTTCAAGAGATAAAGCTCAGAGATCTCTTGTTTCAGTGCAAAAGCCTTTGCACCTTGCATGTATTGGTGTTGGAAATTTTGGGTCAGTGGAGAGTTTTGAGTCAGAGAAGAATCTTGGAAGAGATGATTTGGTGAAGTGTGGAGCTTATGAGGCAGAGAGATCAGAAATTGAAGCTGCAGGGACGCCATCAGAGGCTGCAAAGAAGGTGAAAATTGGGATATATTTTGCAACCTGGTGGGCTTTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTTTGAATGCCTACCCTTACCCTTGGCTCACTTCAACCCTCTCACTTGCTTGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACAAGGATAGCTGAGGCACCTAAGACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTTGCGGCGACAGTTAGTATGTCAAAAGTTGCAGTATCATTTACCCATATTATCAAGAGTGGCGAGCCTGCTTTTAGTGTTCTAGTGTCGAGATTTCTTTTGGGTGAGACCTTCCCAGTGCCAGTCTATCTGTCTTTAATTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTATTCCGTAATATCTTTTCAAAAAGGGGGATGAAGGGAAAATCTGTTAGCGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGTGATTCTCACTCCCTTTGCAATTGCTGTGGAAGGACCGCAGATGTGGGCTGCTGGATGGCAAACAGCCCTCTCTCAAATTGGACCCCAATTCATATGGTGGGTAGCAGCTCAGAGTGTATTCTATCATCTATACAATCAGGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTCAGCGTTGGAAACACCATGAAACGTATATCTGTCATAGTGTCTTCAATTATTATCTTCCACACACCAGTTCAGCCCGTCAATGCTCTTGGAGCTGCTATTGCTATCCTCGGAACCTTCTTATATTCACAGGCAAAACAATAG 1203 0.4239 MISSLRQPGIVGINGSDVVLRKRHATPVKNFGLFLPSLSRDKAQRSLVSVQKPLHLACIGVGNFGSVESFESEKNLGRDDLVKCGAYEAERSEIEAAGTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLVILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02923 400 Pfam Triose-phosphate Transporter family 108 396 IPR004853 -
Rops11g02923 400 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 108 399 IPR004696 GO:0016020|GO:0022857|GO:0055085
Rops11g02923 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 243 - -
Rops11g02923 400 PANTHER SOLUTE CARRIER FAMILY 35 108 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02923 Rops-Chr11 51101734 51106116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02923 39 399 Antiporters AT5G54800 79.891 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02923 K15283 - gmx:100801832 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02923 11 51101734 51106116 Rops9g00388 9 5225106 5229306 PCT