Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02891 ATGAGTTGCTTTTCATGTTGTTCCTCACAAGAGAGGATCAACAAGAAGTCATTGAAGAAGAGCATTAAGGAATACCATGAAGCAAAAGTTCTATCCTCATTTACCAACATATCTCTTAAAACTGATAGTGGCAAGCGAAAGTTCATTGCAGATGAGATAGCAAAGCTTGGGAAAGGAAATATTACCTCTAAGAATTTTACTTATCGTGAGCTATGTGGTGCAACTCAGAACTTTCACCCTTCCAATATGATTGGTGAAGGAGGCTTTGGGAGGGTATACAAAGGACGCATTAAAGGCACAAATCAAGTTGTTGCTGTGAAGCAACTAGACAGGAATGGATTTCAAGGAAACAGGGAATTTCTTGTAGAGGTTCTGATCTTGAGTCTTTTGCACCACCCTAACCTTGTCAATTTGGTAGGGTATTGTGCTGAAGGTGAACAGAGGATTTTGGTATATGAATACATGGCCAATGGTTCTTTAGAAGATCACCTTCTTGAACTACCTCCGGACAGAGAGCCCTTGGACTGGCCAACTAGGATGAAAATTGCAGAAGGTGCAGCAAAAGGACTTGAGTATTTACATGAAGTAGCAAACCCACCAGTAATATATCGTGATTTCAAGGCATCAAACATATTGTTAGATGAAAACTTCAATCCAAAACTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGTGATAATACACATGTATCCACCAGAGTGATGGGAACTTATGGCTATTGTGCTCCTGAGTATGCATCAACAGGGCAGTTGACTACAAAATCAGATGTGTACAGCTTTGGAGTAGTGTTTTTGGAGATGATCACAGGGAGAAGAGTCATTGATAATTCAAGACCATCAGAAGAGCATAATTTAGTCATTTGGGCACAACCACTTCTTAGAGACAGAAAGAAATTTACACTAATGGCAGATCCATTGCTAGAAGATGACTACCCTGTAAAGGGTCTATACCAAGCTCTAGCAGTAGCAGCAATGTGTCTCCAAGAGGAAGCTGATACCAGGCCTTTGATCAGTGATGTAGTTACAGCTCTTGACTTTTTGGCAAGGAAGAAAATAGAGGTGGATGAAGAACAACAAATGATAAAAGCTTCTTCTTCTGCTCAGGATGGAGATGACAGTGGAGACAACAAATCTGATGTAGTAAATGGTGATCATAACAATGATGATGATGATGAGGAGGAGGAGGAGGAGGATGGTGATGATGATGATAATCATAATAAAGGATAG 1251 0.4029 MSCFSCCSSQERINKKSLKKSIKEYHEAKVLSSFTNISLKTDSGKRKFIADEIAKLGKGNITSKNFTYRELCGATQNFHPSNMIGEGGFGRVYKGRIKGTNQVVAVKQLDRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCAEGEQRILVYEYMANGSLEDHLLELPPDREPLDWPTRMKIAEGAAKGLEYLHEVANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDNTHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVFLEMITGRRVIDNSRPSEEHNLVIWAQPLLRDRKKFTLMADPLLEDDYPVKGLYQALAVAAMCLQEEADTRPLISDVVTALDFLARKKIEVDEEQQMIKASSSAQDGDDSGDNKSDVVNGDHNNDDDDEEEEEEDGDDDDNHNKG* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02891 416 Pfam Protein kinase domain 79 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02891 416 MobiDBLite consensus disorder prediction 393 409 - -
Rops11g02891 416 CDD STKc_IRAK 84 353 - -
Rops11g02891 416 MobiDBLite consensus disorder prediction 367 416 - -
Rops11g02891 416 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Rops11g02891 416 Gene3D Transferase(Phosphotransferase) domain 1 155 379 - -
Rops11g02891 416 SUPERFAMILY Protein kinase-like (PK-like) 64 360 IPR011009 -
Rops11g02891 416 Gene3D Phosphorylase Kinase; domain 1 62 154 - -
Rops11g02891 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Rops11g02891 416 PANTHER OS07G0668900 PROTEIN 3 364 - -
Rops11g02891 416 FunFam Serine/threonine-protein kinase PBS1 155 371 - -
Rops11g02891 416 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Rops11g02891 416 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02891 Rops-Chr11 50652888 50655710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02891 1 356 Glycoside Hydrolase AT3G07070 62.604 7.93e-160 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Rops11g02891 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02891 - - gmx:100790474 654.44