Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02865 ATGAATAACAAAGAAAGAGAACAACCTTCTTCTTCTGGAGCCACAACAGGTCCTTCATATAACTCCCCCACACTTGGTATGCAGGAAACTTGCAACTCTCCATCACTATTGAAGAAGTTAGCAAATGAAACTGGTTTGGACTTCAGTGATCAAATTGCCATATTGGACATGAAGTATCACACTATTAAGGTGAATAATGGGTTTAAAAAACCTAAATTGTCAAGGACATCGAGACACCCTAACATGTGTGTTGATGAAGTATTTCCTGCCAAAAAGTCCAAGCTTAGAATTGTTTTTGGAAAGGAAAATGCAAAGGCTGAAGCAGTTGTTAGTTCTTCATTGGCTTGTCTTACCAGTAAGAAATCAGGTGACCAATGTTCAGCATCTGCATCAGCATTTGCACAGGTAGTAGTGGTGTATAACCCACTTGGATGGAGTCGTAGTGATATTGTCATAATACCAGTTAATGATGTTAATCTTGTTGTCAAAGATTCACCCGACAATAAGCTTGAAGCACAATATGTTAACTTAGTAGAACTACCTACCAAGATGCAAAAAGTTACTAGGCTTTACAAAGACAAAGACCATGCTGAAATCAAATTCACCATTGGTCTAATTCCAACTGATGATGGAGTTGGAAAAGAGGTGATCACACAAATGACAGCAAATATGGCCACAAACAAGGAGTTTTATACTGATTCTAATAGAAGAGATTTTCTAAAACGGGTTAGCTTCTTTAGACAATTCGTTGGATCTGTTAATAAAGTTGATTATTTGACATTAAGGCATGGATTTATCACGGCACATCTAGCACCAGGAAATGATGCACAATTTGATTTCCAAAAATATATCAACAGATCACTTGAAGAGGATTTTAAAGTTGTGGTAGGAATCAGTCCAATCATTTGGTTCGTTGCTGTGCTATTCCTGCTGACTAATACTCATGACATCACAAAGTTGCTTGCTCACTTATGGAGAGCTTGCATAGCCCATGGAGGTGCGCTGACGTCCTTATATGATTATATCCCACGCATGCGGAGCTCTGAATCAAAGGAAGTATCAGAAAACTCAGCAAGTTCTTTATCTAACAAGAGGAAATACAATATATTGGTATCTCTGAGTGGTCACTTATTTGATATGTTTCTGATAAATAAGGCCTTAGATATTATTGAAGCTGCAAGAGGCTCCTTCCATATGGGTCAGAGTGTTGATGTTATGTCATACTCTAAACTTGAAGATGACCTCATTGCTTATCCTGCCAGCAAGTGGTAA 1272 0.3805 MNNKEREQPSSSGATTGPSYNSPTLGMQETCNSPSLLKKLANETGLDFSDQIAILDMKYHTIKVNNGFKKPKLSRTSRHPNMCVDEVFPAKKSKLRIVFGKENAKAEAVVSSSLACLTSKKSGDQCSASASAFAQVVVVYNPLGWSRSDIVIIPVNDVNLVVKDSPDNKLEAQYVNLVELPTKMQKVTRLYKDKDHAEIKFTIGLIPTDDGVGKEVITQMTANMATNKEFYTDSNRRDFLKRVSFFRQFVGSVNKVDYLTLRHGFITAHLAPGNDAQFDFQKYINRSLEEDFKVVVGISPIIWFVAVLFLLTNTHDITKLLAHLWRACIAHGGALTSLYDYIPRMRSSESKEVSENSASSLSNKRKYNILVSLSGHLFDMFLINKALDIIEAARGSFHMGQSVDVMSYSKLEDDLIAYPASKW* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02865 423 Pfam LOR/SDH bifunctional enzyme conserved region 370 410 IPR007545 -
Rops11g02865 423 SUPERFAMILY Galactose mutarotase-like 184 250 IPR011013 GO:0003824|GO:0005975|GO:0030246
Rops11g02865 423 PANTHER MLO-LIKE PROTEIN 1 236 327 IPR004326 GO:0006952|GO:0016020
Rops11g02865 423 Pfam Glycosyl hydrolases family 38 C-terminal domain 182 243 IPR011682 GO:0004559|GO:0006013
Rops11g02865 423 Pfam Mlo family 235 321 IPR004326 GO:0006952|GO:0016020
Rops11g02865 423 Gene3D - 163 257 - -
Rops11g02865 423 MobiDBLite consensus disorder prediction 1 28 - -
Rops11g02865 423 SUPERFAMILY Galactose mutarotase-like 135 184 IPR011013 GO:0003824|GO:0005975|GO:0030246
Rops11g02865 423 Gene3D LOR/SDH bifunctional enzyme, conserved domain 366 412 IPR043009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02865 Rops-Chr11 50036735 50060886 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02865 243 325 MLO family AT1G61560 71.084 1.26e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02865 K14157 - gmx:100811246 151.369