Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02861 ATGGGCTCCAATAACCAAATGCAACAAGAAATATCAGAATTGCGAGCAAGTTTGGAAAGAGAAACACATAAGAGACATGAACTTCAGAATGCTATTTCCTTAGTCTTCCTAGAGCTTGCTGCAATTCTTAACCAAATGAATAACAAAGAAAGAGAACAACCTTCTTCTTCTGGAGCCACAACAGGTCCTTCATATAACTCCCCCACACTTGGTATGGAGGAAACTTGCAACTCTCCATCACTATTGAAGAAGTTAGCAAATGAAACTGGTTTGGACTTCAGTGACAAAATTGCCATATTGGACATGAAGTATCAGCAGGCTGAAGCAGTTGTTAGTTCTTCATTGGCTTGTCTTACCAGTAAGAAATCAGGTGACCAATGTTCAGCATCTGCATCAGCATTTGCACCAGCATTTGCACAGGTTGTAGTGGTGTATAACCCACTTGGATGGAGTCGTAGTGATATTGTCATAATACCAGTTAATGATGTTAATCTTGTTGTCAAAGATTCACCCGACAATAAGCTTGAAGCACAATATGTTAACTTAGCAGAACTACCTACCAAGATGCAAAAAGTTACTAGGCTTTACAAAGACAAAGACCATGCTGAAATCAAATTCACCATTGGTCCAATTCCAACTGATGATAGAGTTGGAAAAGAGGTGATCACACAAATGACAGCAAATATGGCCACAAACAAGGAGTTTTATACTGATTCTAATAGAAGAGATTTTCTAAAACGGGTTAGCTTCTTTAGACAATTTGTTGGATCTGTTAATAAAGTTGATTATTTGACATTAAGGCATGGATTTATCACAGCACATCTAGAACCAGGAAATGATGCACAATTTGATTTCCAAAAATATATCAACAGATCACTTGAAGAGGATTTTAAAGTTGTGGTAGGAATCAGGGAAGTATCAGAAAACTCAGCAAGTTCTTTATCTAACAAGAGGAAATACAATATATTGGTATCTCTGAGTGGTCGCTTATTTGATAAGTTTCTGATAAATAAGGCCTTAGATATTATTGAAGCTGCAAGAGGCTCCTTCCACTTAGTCAACTGCCATGTGGGTCAGAGTGTTGATGTTATGTCATACTCTGAACTTGAAGTAAGTGGTCTTCTATTTCAAACTGGAATGTTTACTTAA 1149 0.3725 MGSNNQMQQEISELRASLERETHKRHELQNAISLVFLELAAILNQMNNKEREQPSSSGATTGPSYNSPTLGMEETCNSPSLLKKLANETGLDFSDKIAILDMKYQQAEAVVSSSLACLTSKKSGDQCSASASAFAPAFAQVVVVYNPLGWSRSDIVIIPVNDVNLVVKDSPDNKLEAQYVNLAELPTKMQKVTRLYKDKDHAEIKFTIGPIPTDDRVGKEVITQMTANMATNKEFYTDSNRRDFLKRVSFFRQFVGSVNKVDYLTLRHGFITAHLEPGNDAQFDFQKYINRSLEEDFKVVVGIREVSENSASSLSNKRKYNILVSLSGRLFDKFLINKALDIIEAARGSFHLVNCHVGQSVDVMSYSELEVSGLLFQTGMFT* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02861 382 Coils Coil 4 31 - -
Rops11g02861 382 Pfam LOR/SDH bifunctional enzyme conserved region 323 373 IPR007545 -
Rops11g02861 382 PANTHER ALPHA-MANNOSIDASE 188 247 - -
Rops11g02861 382 Gene3D - 166 262 - -
Rops11g02861 382 Pfam Glycosyl hydrolases family 38 C-terminal domain 186 248 IPR011682 GO:0004559|GO:0006013
Rops11g02861 382 Gene3D LOR/SDH bifunctional enzyme, conserved domain 319 375 IPR043009 -
Rops11g02861 382 Pfam Mlo family 239 304 IPR004326 GO:0006952|GO:0016020
Rops11g02861 382 MobiDBLite consensus disorder prediction 48 73 - -
Rops11g02861 382 SUPERFAMILY Galactose mutarotase-like 134 255 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02861 Rops-Chr11 49761491 49776692 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02861 248 306 MLO family AT1G61560 74.576 1.42e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02861 K01191 K14157 gmx:100775419 111.694